RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 IER5Q5VY09 327 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MICALCLQ6ZW33 695 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TRMT10CQ7L0Y3 403 aaKnown RBP12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 UBR7Q8N806 425 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 C10orf88Q9H8K7 445 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CPSF3Q9UKF6 684 aaKnown RBP12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SCINQ9Y6U3 715 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SRRM3A6NNA2 597 aaPredicted RBP12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CXCL8P10145 99 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TGFB3P10600 412 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CETPP11597 493 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CD19P15391 556 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PLCB4Q15147 1175 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SMTNL2Q2TAL5 461 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 P3H1Q32P28 736 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CYP4F22Q6NT55 531 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 DNAJC24Q6P3W2 148 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CYP4X1Q8N118 509 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 EXD1Q8NHP7 514 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 GRK7Q8WTQ7 553 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MAIP1Q8WWC4 291 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ARHGEF2Q92974 986 aaKnown RBP12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TRAIPQ9BWF2 469 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 NIF3L1Q9GZT8 377 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 IP6K2Q9UHH9 426 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PPP2R3BQ9Y5P8 575 aa12.49□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 KRT1P04264 644 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ZNF699Q32M78 642 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 KCNT1Q5JUK3 1230 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CELF3Q5SZQ8 465 aaKnown RBP12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 GKAP1Q5VSY0 366 aaPredicted RBP12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 IZUMO3Q5VZ72 239 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SULF1Q8IWU6 871 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 DHX37Q8IY37 1157 aaKnown RBP12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 LRRC34Q8IZ02 419 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CACNA2D3Q8IZS8 1091 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 KCNN1Q92952 543 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TMEM109Q9BVC6 243 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 XYLT2Q9H1B5 865 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 NINJ2Q9NZG7 142 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 RBPJLQ9UBG7 517 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ZNF148Q9UQR1 794 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PTPRFP10586 1907 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 H0YHG0 523 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ASPAP45381 313 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CDR1P51861 262 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MCL1Q07820 350 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SGSM1Q2NKQ1 1148 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TNFAIP8L3Q5GJ75 292 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 EFCAB12Q6NXP0 572 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 DENND1BQ6P3S1 775 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TAX1BP1Q86VP1 789 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ERICH1Q86X53 443 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SPATS2Q86XZ4 545 aaKnown RBP12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ZBTB8OSQ8IWT0 167 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SLITRK1Q96PX8 696 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 RNPEPQ9H4A4 650 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CYTH4Q9UIA0 394 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 LRRD1A4D1F6 860 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 DNM1LO00429 736 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 VIMP08670 466 aaKnown RBP12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 RFC1P35251 1148 aaPredicted RBP12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 DYNLT1P63172 113 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TTLL12Q14166 644 aaPredicted RBP12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MXD4Q14582 209 aaPredicted RBP12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 WDR72Q3MJ13 1102 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ATF7IP2Q5U623 682 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CDCA2Q69YH5 1023 aaPredicted RBP12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CAPN12Q6ZSI9 719 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TAB3Q8N5C8 712 aaPredicted RBP12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ANKRD42Q8N9B4 389 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TMEM35BQ8NCS4 154 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 ADAM33Q9BZ11 813 aa12.48□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TCRBV5S1A1TA0A578 114 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 C5orf60A6NFR6 353 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 KLRC2P26717 231 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MAN1A1P33908 653 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PLCB3Q01970 1234 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MTM1Q13496 603 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 MPP2Q14168 576 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CNGA2Q16280 664 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CCDC121Q6ZUS5 278 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 PLCD3Q8N3E9 789 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 EMC1Q8N766 993 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CCDC89Q8N998 374 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CENPTQ96BT3 561 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 DCPSQ96C86 337 aaKnown RBP12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 KCNK9Q9NPC2 374 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 HMGXB4Q9UGU5 601 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 WDR90Q96KV7 1748 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 GOLGA6L7A0A1B0GV03 622 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TMEM120BA0PK00 339 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 LIASO43766 372 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 CPP00450 1065 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 GH1P01241 217 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 IFNB1P01574 187 aa12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 TXNP10599 105 aaKnown RBP12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 LACTBP83111 547 aaPredicted RBP12.47□□□□□ -0.41
HMGN3-AS1-201ENST00000604516 SLC20A2Q08357 652 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms