RNA–Protein interactions for RNA: ENST00000602499.5

UBE2E3-207, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-207ENST00000602499 MICALL1Q8N3F8 863 aa23.54■■□□□ 1.36
UBE2E3-207ENST00000602499 SLC22A17Q8WUG5 538 aa23.54■■□□□ 1.36
UBE2E3-207ENST00000602499 SEMA4DQ92854 862 aa23.54■■□□□ 1.36
UBE2E3-207ENST00000602499 MMS19Q96T76 1030 aa23.54■■□□□ 1.36
UBE2E3-207ENST00000602499 FAM124BQ9H5Z6 455 aaPredicted RBP23.54■■□□□ 1.36
UBE2E3-207ENST00000602499 NXF1Q9UBU9 619 aaKnown RBP23.54■■□□□ 1.36
UBE2E3-207ENST00000602499 TSC2P49815 1807 aa23.54■■□□□ 1.36
UBE2E3-207ENST00000602499 XIRP2A4UGR9 3374 aa23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 LRRC10BA6NIK2 292 aa23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 WARSP23381 471 aaKnown RBP23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 OR1D2P34982 312 aa23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 NOP14P78316 857 aaKnown RBP23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 ADAM15Q13444 863 aa23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 LILRA6Q6PI73 481 aa23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 LRSAM1Q6UWE0 723 aa23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 RSPO2Q6UXX9 243 aaPredicted RBP23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 ADGRF2Q8IZF7 708 aa23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 MAFAQ8NHW3 353 aaPredicted RBP23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 HDAC7Q8WUI4 952 aa23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 PABPC5Q96DU9 382 aaKnown RBP23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 ACBD6Q9BR61 282 aa23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 HSD3B7Q9H2F3 369 aa23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 DPP7Q9UHL4 492 aa23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 MAFFQ9ULX9 164 aa23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 CDY1Q9Y6F8 540 aa23.53■■□□□ 1.36
UBE2E3-207ENST00000602499 SRGAP2BP0DMP2 458 aa23.52■■□□□ 1.36
UBE2E3-207ENST00000602499 RPL17P18621 184 aaKnown RBP23.52■■□□□ 1.36
UBE2E3-207ENST00000602499 VWA3BQ502W6 1294 aa23.52■■□□□ 1.36
UBE2E3-207ENST00000602499 HSP90AA4PQ58FG1 418 aa23.52■■□□□ 1.36
UBE2E3-207ENST00000602499 MIIPQ5JXC2 388 aa23.52■■□□□ 1.36
UBE2E3-207ENST00000602499 ANKRD20A12PQ8NF67 263 aa23.52■■□□□ 1.36
UBE2E3-207ENST00000602499 KBTBD7Q8WVZ9 684 aa23.52■■□□□ 1.36
UBE2E3-207ENST00000602499 RTP3Q9BQQ7 232 aa23.52■■□□□ 1.36
UBE2E3-207ENST00000602499 PI4K2AQ9BTU6 479 aa23.52■■□□□ 1.36
UBE2E3-207ENST00000602499 NIF3L1Q9GZT8 377 aa23.52■■□□□ 1.36
UBE2E3-207ENST00000602499 NDST4Q9H3R1 872 aa23.52■■□□□ 1.36
UBE2E3-207ENST00000602499 IGFLR1Q9H665 355 aa23.52■■□□□ 1.36
UBE2E3-207ENST00000602499 CYP3A43Q9HB55 503 aa23.52■■□□□ 1.36
UBE2E3-207ENST00000602499 APOBEC3GQ9HC16 384 aaKnown RBP23.52■■□□□ 1.36
UBE2E3-207ENST00000602499 HCFC2Q9Y5Z7 792 aa23.52■■□□□ 1.36
UBE2E3-207ENST00000602499 BECN2A8MW95 431 aa23.51■■□□□ 1.35
UBE2E3-207ENST00000602499 ADAM12O43184 909 aa23.51■■□□□ 1.35
UBE2E3-207ENST00000602499 ABLIM3O94929 683 aa23.51■■□□□ 1.35
UBE2E3-207ENST00000602499 GLUD1P00367 558 aa23.51■■□□□ 1.35
UBE2E3-207ENST00000602499 GTF2F1P35269 517 aaKnown RBP eCLIP23.51■■□□□ 1.357e-7■■■■■ 27.5
UBE2E3-207ENST00000602499 ZNF445P59923 1031 aa23.51■■□□□ 1.35
UBE2E3-207ENST00000602499 SMARCB1Q12824 385 aa23.51■■□□□ 1.35
UBE2E3-207ENST00000602499 CCDC85BQ15834 202 aaPredicted RBP23.51■■□□□ 1.35
UBE2E3-207ENST00000602499 TPGS2Q68CL5 300 aa23.51■■□□□ 1.35
UBE2E3-207ENST00000602499 RTL10Q7L3V2 364 aa23.51■■□□□ 1.35
UBE2E3-207ENST00000602499 EHBP1Q8NDI1 1231 aa23.51■■□□□ 1.35
UBE2E3-207ENST00000602499 ZNF461Q8TAF7 563 aa23.51■■□□□ 1.35
UBE2E3-207ENST00000602499 LMO3Q8TAP4 145 aa23.51■■□□□ 1.35
UBE2E3-207ENST00000602499 BCO2Q9BYV7 579 aa23.51■■□□□ 1.35
UBE2E3-207ENST00000602499 CBX8Q9HC52 389 aa23.51■■□□□ 1.35
UBE2E3-207ENST00000602499 LIMA1Q9UHB6 759 aaKnown RBP23.51■■□□□ 1.35
UBE2E3-207ENST00000602499 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.5■■□□□ 1.35
UBE2E3-207ENST00000602499 TGM5O43548 720 aa23.5■■□□□ 1.35
UBE2E3-207ENST00000602499 TPM2P07951 284 aa23.5■■□□□ 1.35
UBE2E3-207ENST00000602499 PCSK1P29120 753 aa23.5■■□□□ 1.35
UBE2E3-207ENST00000602499 ASPAP45381 313 aa23.5■■□□□ 1.35
UBE2E3-207ENST00000602499 ROR1Q01973 937 aa23.5■■□□□ 1.35
UBE2E3-207ENST00000602499 SPOPLQ6IQ16 392 aa23.5■■□□□ 1.35
UBE2E3-207ENST00000602499 ELMSAN1Q6PJG2 1045 aa23.5■■□□□ 1.35
UBE2E3-207ENST00000602499 FAM200AQ8TCP9 573 aa23.5■■□□□ 1.35
UBE2E3-207ENST00000602499 CASP10Q92851 521 aa23.5■■□□□ 1.35
UBE2E3-207ENST00000602499 PLEKHA4Q9H4M7 779 aa23.5■■□□□ 1.35
UBE2E3-207ENST00000602499 DDX43Q9NXZ2 648 aaKnown RBP23.5■■□□□ 1.35
UBE2E3-207ENST00000602499 POLIQ9UNA4 740 aa23.5■■□□□ 1.35
UBE2E3-207ENST00000602499 MUC3AQ02505 3323 aa23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 MTCL1Q9Y4B5 1905 aaKnown RBP23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 BRWD1Q9NSI6 2320 aa23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 LRRN2O75325 713 aa23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 CDK11BP21127 795 aaKnown RBP23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 GNL1P36915 607 aaPredicted RBP23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 GPR17Q13304 367 aa23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 KRT31Q15323 416 aa23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 GBP6Q6ZN66 633 aa23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 PALB2Q86YC2 1186 aa23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 TTC39CQ8N584 583 aa23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 VN1R2Q8NFZ6 395 aa23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 OR10T2Q8NGX3 314 aa23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 ZCWPW1Q9H0M4 648 aa23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 SNX25Q9H3E2 840 aa23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 DZANK1Q9NVP4 752 aa23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 COG5Q9UP83 839 aa23.49■■□□□ 1.35
UBE2E3-207ENST00000602499 WDR27A2RRH5 827 aa23.48■■□□□ 1.35
UBE2E3-207ENST00000602499 CLSTN1O94985 981 aa23.48■■□□□ 1.35
UBE2E3-207ENST00000602499 GLP2RO95838 553 aa23.48■■□□□ 1.35
UBE2E3-207ENST00000602499 ATF2P15336 505 aa23.48■■□□□ 1.35
UBE2E3-207ENST00000602499 EPCAMP16422 314 aa23.48■■□□□ 1.35
UBE2E3-207ENST00000602499 TSPY1Q01534 308 aa23.48■■□□□ 1.35
UBE2E3-207ENST00000602499 SMYD5Q6GMV2 418 aa23.48■■□□□ 1.35
UBE2E3-207ENST00000602499 OSTM1Q86WC4 334 aa23.48■■□□□ 1.35
UBE2E3-207ENST00000602499 DCP1BQ8IZD4 617 aaKnown RBP23.48■■□□□ 1.35
UBE2E3-207ENST00000602499 PPM1EQ8WY54 764 aa23.48■■□□□ 1.35
UBE2E3-207ENST00000602499 MRPL45Q9BRJ2 306 aaKnown RBP23.48■■□□□ 1.35
UBE2E3-207ENST00000602499 TSPY26PQ9H489 355 aa23.48■■□□□ 1.35
UBE2E3-207ENST00000602499 SMYD3Q9H7B4 428 aa23.48■■□□□ 1.35
UBE2E3-207ENST00000602499 CLDND1Q9NY35 253 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms