RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 CLIC4Q9Y696 253 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 STYXL1Q9Y6J8 313 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 OTOGLQ3ZCN5 2332 aa14.24□□□□□ -0.13
RPS28-204ENST00000602140 CYB561D2O14569 222 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 CHADO15335 359 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 LILRB5O75023 590 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 GABRR2P28476 465 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 FCHO2Q0JRZ9 810 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 MGAT5BQ3V5L5 792 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 SLC39A12Q504Y0 691 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 GPR158Q5T848 1215 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 ITIH5Q86UX2 942 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 METTL23Q86XA0 190 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 FAM200AQ8TCP9 573 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 POMGNT1Q8WZA1 660 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 SEPT5Q99719 369 aaPredicted RBP14.23□□□□□ -0.13
RPS28-204ENST00000602140 LPIN3Q9BQK8 851 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 PYM1Q9BRP8 204 aaKnown RBP14.23□□□□□ -0.13
RPS28-204ENST00000602140 MKNK1Q9BUB5 465 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 FAM126AQ9BYI3 521 aaPredicted RBP14.23□□□□□ -0.13
RPS28-204ENST00000602140 ZCWPW1Q9H0M4 648 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 HSFX1Q9UBD0 423 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 CCDC39Q9UFE4 941 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 DSEQ9UL01 958 aa14.23□□□□□ -0.13
RPS28-204ENST00000602140 SLC38A8A6NNN8 435 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 TULP1O00294 542 aaPredicted RBP14.22□□□□□ -0.13
RPS28-204ENST00000602140 DPYSL4O14531 572 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 PPP1R37O75864 691 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 FGF19O95750 216 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 CHRNB1P11230 501 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 ADSSP30520 456 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 TUFMP49411 452 aaKnown RBP14.22□□□□□ -0.13
RPS28-204ENST00000602140 TAF6P49848 677 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 KPNA1P52294 538 aaPredicted RBP14.22□□□□□ -0.13
RPS28-204ENST00000602140 MLLT6P55198 1093 aaPredicted RBP14.22□□□□□ -0.13
RPS28-204ENST00000602140 CUL4AQ13619 759 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 PPP2R5DQ14738 602 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 VEPH1Q14D04 833 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 PTPAQ15257 358 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 ARHGAP15Q53QZ3 475 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 WSCD1Q658N2 575 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 CRELD2Q6UXH1 353 aaPredicted RBP14.22□□□□□ -0.13
RPS28-204ENST00000602140 MAMSTRQ6ZN01 415 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 EFCAB13Q8IY85 973 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 THEM5Q8N1Q8 247 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 LRRC3BQ96PB8 259 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 IER2Q9BTL4 223 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 EPC1Q9H2F5 836 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 MRPL44Q9H9J2 332 aaKnown RBP14.22□□□□□ -0.13
RPS28-204ENST00000602140 STK17AQ9UEE5 414 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 FBXO2Q9UK22 296 aaPredicted RBP14.22□□□□□ -0.13
RPS28-204ENST00000602140 SMG5Q9UPR3 1016 aaKnown RBP14.22□□□□□ -0.13
RPS28-204ENST00000602140 TSC2P49815 1807 aa14.22□□□□□ -0.13
RPS28-204ENST00000602140 DNAH14Q0VDD8 3507 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 GPR179Q6PRD1 2367 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 MYMKA6NI61 221 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 IL18RAPO95256 599 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 TDGF1P13385 188 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 ATF6P18850 670 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 PDCP20941 246 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 SOX9P48436 509 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 CCR3P51677 355 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 NRLP54845 237 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 CYP4F8P98187 520 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 POU5F1Q01860 360 aaKnown RBP14.21□□□□□ -0.13
RPS28-204ENST00000602140 KCNA1Q09470 495 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 PUM1Q14671 1186 aaKnown RBP eCLIP14.21□□□□□ -0.13
RPS28-204ENST00000602140 POSTNQ15063 836 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 TAF12Q16514 161 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 RRAGBQ5VZM2 374 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 DGLUCYQ7Z3D6 616 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 LRRTM3Q86VH5 581 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 TTC8Q8TAM2 541 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 GIPC2Q8TF65 315 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 SECISBP2LQ93073 1101 aaKnown RBP14.21□□□□□ -0.13
RPS28-204ENST00000602140 HVCN1Q96D96 273 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 MSANTD3Q96H12 275 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 ZFYVE19Q96K21 471 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 CLIC6Q96NY7 704 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 STRA6Q9BX79 667 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 C8orf33Q9H7E9 229 aaPredicted RBP14.21□□□□□ -0.13
RPS28-204ENST00000602140 TBC1D7Q9P0N9 293 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 SEL1LQ9UBV2 794 aa14.21□□□□□ -0.13
RPS28-204ENST00000602140 SRPRBQ9Y5M8 271 aaKnown RBP14.21□□□□□ -0.13
RPS28-204ENST00000602140 ANK1P16157 1881 aa14.21□□□□□ -0.14
RPS28-204ENST00000602140 KPNA7A9QM74 516 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 SPECC1L-ADORA2AF8WAN1 911 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 TXLNAP40222 546 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 CXCL12P48061 93 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 SATB1Q01826 763 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 CEBPZQ03701 1054 aaKnown RBP14.2□□□□□ -0.14
RPS28-204ENST00000602140 GAS6Q14393 721 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 SV2CQ496J9 727 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 ARHGAP29Q52LW3 1261 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 FAM173BQ6P4H8 233 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 C1orf228Q6PIY5 440 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 SV2BQ7L1I2 683 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 SPPL2BQ8TCT7 592 aa14.2□□□□□ -0.14
RPS28-204ENST00000602140 C2orf15Q8WU43 125 aaKnown RBP14.2□□□□□ -0.14
RPS28-204ENST00000602140 DNAJC19Q96DA6 116 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms