RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 SPTLC1O15269 473 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 RFC2P35250 354 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 CLCNKBP51801 687 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 NDST1P52848 882 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 NOMO2Q5JPE7 1267 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 UNC93AQ86WB7 457 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 TOP6BLQ8N6T0 577 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 SLC4A11Q8NBS3 891 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 TRIM58Q8NG06 486 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 WDR24Q96S15 920 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 MCOLN1Q9GZU1 580 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 LRFN2Q9ULH4 789 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 CEP83Q9Y592 693 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 TANC1Q9C0D5 1861 aa19.16■□□□□ 0.66
VRK3-225ENST00000601912 A0A0A6YYK5 440 aaPredicted RBP19.16■□□□□ 0.66
VRK3-225ENST00000601912 CASTOR2A6NHX0 329 aa19.16■□□□□ 0.66
VRK3-225ENST00000601912 CYP1A1P04798 512 aaPredicted RBP19.16■□□□□ 0.66
VRK3-225ENST00000601912 FAM163BP0C2L3 166 aa19.16■□□□□ 0.66
VRK3-225ENST00000601912 UNGP13051 313 aaPredicted RBP19.16■□□□□ 0.66
VRK3-225ENST00000601912 ABCB4P21439 1286 aa19.16■□□□□ 0.66
VRK3-225ENST00000601912 PAX3P23760 479 aa19.16■□□□□ 0.66
VRK3-225ENST00000601912 BRD2P25440 801 aaKnown RBP19.16■□□□□ 0.66
VRK3-225ENST00000601912 UPP1Q16831 310 aa19.16■□□□□ 0.66
VRK3-225ENST00000601912 SOWAHAQ2M3V2 549 aa19.16■□□□□ 0.66
VRK3-225ENST00000601912 DEFB128Q7Z7B8 93 aa19.16■□□□□ 0.66
VRK3-225ENST00000601912 DNAAF5Q86Y56 855 aa19.16■□□□□ 0.66
VRK3-225ENST00000601912 ABI1Q8IZP0 508 aa19.16■□□□□ 0.66
VRK3-225ENST00000601912 SLC35F6Q8N357 371 aa19.16■□□□□ 0.66
VRK3-225ENST00000601912 OR6B3Q8NGW1 331 aa19.16■□□□□ 0.66
VRK3-225ENST00000601912 HEXIM2Q96MH2 286 aaKnown RBP19.16■□□□□ 0.66
VRK3-225ENST00000601912 MRPL45Q9BRJ2 306 aaKnown RBP19.16■□□□□ 0.66
VRK3-225ENST00000601912 ELOVL4Q9GZR5 314 aa19.16■□□□□ 0.66
VRK3-225ENST00000601912 HOXA2O43364 376 aa19.15■□□□□ 0.66
VRK3-225ENST00000601912 MOCS3O95396 460 aa19.15■□□□□ 0.66
VRK3-225ENST00000601912 LSM8O95777 96 aaKnown RBP19.15■□□□□ 0.66
VRK3-225ENST00000601912 VDRP11473 427 aa19.15■□□□□ 0.66
VRK3-225ENST00000601912 NOP2P46087 812 aaKnown RBP19.15■□□□□ 0.66
VRK3-225ENST00000601912 NSFP46459 744 aaKnown RBP19.15■□□□□ 0.66
VRK3-225ENST00000601912 CLLU1OSQ5K130 101 aa19.15■□□□□ 0.66
VRK3-225ENST00000601912 CYFIP2Q96F07 1278 aa19.15■□□□□ 0.66
VRK3-225ENST00000601912 TWNKQ96RR1 684 aa19.15■□□□□ 0.66
VRK3-225ENST00000601912 SNX25Q9H3E2 840 aa19.15■□□□□ 0.66
VRK3-225ENST00000601912 HMGXB4Q9UGU5 601 aa19.15■□□□□ 0.66
VRK3-225ENST00000601912 PCDHGC3Q9UN70 934 aa19.15■□□□□ 0.66
VRK3-225ENST00000601912 CYB561D2O14569 222 aa19.14■□□□□ 0.66
VRK3-225ENST00000601912 BUB1O43683 1085 aa19.14■□□□□ 0.66
VRK3-225ENST00000601912 FGFR1P11362 822 aa19.14■□□□□ 0.66
VRK3-225ENST00000601912 GPC5P78333 572 aa19.14■□□□□ 0.66
VRK3-225ENST00000601912 CENPCQ03188 943 aa19.14■□□□□ 0.66
VRK3-225ENST00000601912 SGO2Q562F6 1265 aa19.14■□□□□ 0.66
VRK3-225ENST00000601912 NAA35Q5VZE5 725 aa19.14■□□□□ 0.66
VRK3-225ENST00000601912 RFFLQ8WZ73 363 aa19.14■□□□□ 0.66
VRK3-225ENST00000601912 TFAP2BQ92481 460 aa19.14■□□□□ 0.66
VRK3-225ENST00000601912 TRIM11Q96F44 468 aa19.14■□□□□ 0.66
VRK3-225ENST00000601912 ZNF518BQ9C0D4 1074 aa19.14■□□□□ 0.66
VRK3-225ENST00000601912 THAP2Q9H0W7 228 aa19.14■□□□□ 0.66
VRK3-225ENST00000601912 SALL4Q9UJQ4 1053 aa19.14■□□□□ 0.66
VRK3-225ENST00000601912 TDRD15B5MCY1 1934 aaKnown RBP19.14■□□□□ 0.65
VRK3-225ENST00000601912 CTAGE9A4FU28 777 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 A8MXQ7 604 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 GNL1P36915 607 aaPredicted RBP19.14■□□□□ 0.65
VRK3-225ENST00000601912 RNASELQ05823 741 aaKnown RBP19.14■□□□□ 0.65
VRK3-225ENST00000601912 ORC1Q13415 861 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 IKBKEQ14164 716 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 STILQ15468 1287 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 CNKSR3Q6P9H4 555 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 DSTYKQ6XUX3 929 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 LIMS2Q7Z4I7 341 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 PASD1Q8IV76 773 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 RHOT2Q8IXI1 618 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 ADGRF2Q8IZF7 708 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 TMEM35BQ8NCS4 154 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 CPA5Q8WXQ8 436 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 CALR3Q96L12 384 aaKnown RBP19.14■□□□□ 0.65
VRK3-225ENST00000601912 SENP8Q96LD8 212 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 FAM193BQ96PV7 902 aaPredicted RBP19.14■□□□□ 0.65
VRK3-225ENST00000601912 PRDM5Q9NQX1 630 aaPredicted RBP19.14■□□□□ 0.65
VRK3-225ENST00000601912 CACNG4Q9UBN1 327 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 L1RE1Q9UN81 338 aa19.14■□□□□ 0.65
VRK3-225ENST00000601912 NCANO14594 1321 aa19.13■□□□□ 0.65
VRK3-225ENST00000601912 B3GAT3O94766 335 aa19.13■□□□□ 0.65
VRK3-225ENST00000601912 TIMP1P01033 207 aa19.13■□□□□ 0.65
VRK3-225ENST00000601912 CFHP08603 1231 aa19.13■□□□□ 0.65
VRK3-225ENST00000601912 MYBL1P10243 752 aa19.13■□□□□ 0.65
VRK3-225ENST00000601912 NOMO3P69849 1222 aa19.13■□□□□ 0.65
VRK3-225ENST00000601912 DCLRE1AQ6PJP8 1040 aa19.13■□□□□ 0.65
VRK3-225ENST00000601912 TMEM86AQ8N2M4 240 aa19.13■□□□□ 0.65
VRK3-225ENST00000601912 PDCL2Q8N4E4 241 aa19.13■□□□□ 0.65
VRK3-225ENST00000601912 RSPH1Q8WYR4 309 aa19.13■□□□□ 0.65
VRK3-225ENST00000601912 NAPGQ99747 312 aaPredicted RBP19.13■□□□□ 0.65
VRK3-225ENST00000601912 ZSWIM1Q9BR11 485 aa19.13■□□□□ 0.65
VRK3-225ENST00000601912 LHX5Q9H2C1 402 aa19.13■□□□□ 0.65
VRK3-225ENST00000601912 TET1Q8NFU7 2136 aa19.13■□□□□ 0.65
VRK3-225ENST00000601912 SCN5AQ14524 2016 aa19.12■□□□□ 0.65
VRK3-225ENST00000601912 KIAA0355O15063 1070 aa19.12■□□□□ 0.65
VRK3-225ENST00000601912 RAG1P15918 1043 aa19.12■□□□□ 0.65
VRK3-225ENST00000601912 WARSP23381 471 aaKnown RBP19.12■□□□□ 0.65
VRK3-225ENST00000601912 SSTR3P32745 418 aaPredicted RBP19.12■□□□□ 0.65
VRK3-225ENST00000601912 CNGA2Q16280 664 aa19.12■□□□□ 0.65
VRK3-225ENST00000601912 TCTN1Q2MV58 587 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms