RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 MORC2Q9Y6X9 1032 aaPredicted RBP18.37■□□□□ 0.53
SCAF1-204ENST00000601038 PATJQ8NI35 1801 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 ANK1P16157 1881 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 EP300Q09472 2414 aaPredicted RBP18.37■□□□□ 0.53
SCAF1-204ENST00000601038 GVINP1Q7Z2Y8 2422 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 NCANO14594 1321 aa18.36■□□□□ 0.53
SCAF1-204ENST00000601038 ID4P47928 161 aa18.36■□□□□ 0.53
SCAF1-204ENST00000601038 CEBPZQ03701 1054 aaKnown RBP18.36■□□□□ 0.53
SCAF1-204ENST00000601038 KCNA1Q09470 495 aa18.36■□□□□ 0.53
SCAF1-204ENST00000601038 SMARCB1Q12824 385 aa18.36■□□□□ 0.53
SCAF1-204ENST00000601038 SLC39A12Q504Y0 691 aa18.36■□□□□ 0.53
SCAF1-204ENST00000601038 MAMSTRQ6ZN01 415 aa18.36■□□□□ 0.53
SCAF1-204ENST00000601038 CCDC73Q6ZRK6 1079 aa18.36■□□□□ 0.53
SCAF1-204ENST00000601038 ARID3BQ8IVW6 561 aaPredicted RBP18.36■□□□□ 0.53
SCAF1-204ENST00000601038 THEM5Q8N1Q8 247 aa18.36■□□□□ 0.53
SCAF1-204ENST00000601038 ZBTB44Q8NCP5 570 aa18.36■□□□□ 0.53
SCAF1-204ENST00000601038 ATRIPQ8WXE1 791 aa18.36■□□□□ 0.53
SCAF1-204ENST00000601038 RUBCNQ92622 972 aa18.36■□□□□ 0.53
SCAF1-204ENST00000601038 NELL1Q92832 810 aa18.36■□□□□ 0.53
SCAF1-204ENST00000601038 INTS4Q96HW7 963 aaKnown RBP18.36■□□□□ 0.53
SCAF1-204ENST00000601038 ACCSQ96QU6 501 aa18.36■□□□□ 0.53
SCAF1-204ENST00000601038 ZSCAN32Q9NX65 697 aa18.36■□□□□ 0.53
SCAF1-204ENST00000601038 PIAS3Q9Y6X2 628 aa18.36■□□□□ 0.53
SCAF1-204ENST00000601038 KPNA7A9QM74 516 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 ARNTLO00327 626 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 CHADO15335 359 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 SOAT2O75908 522 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 FCHO2Q0JRZ9 810 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 MTAPQ13126 283 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 SLC39A14Q15043 492 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 STXBP5Q5T5C0 1151 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 L1TD1Q5T7N2 865 aaKnown RBP18.35■□□□□ 0.53
SCAF1-204ENST00000601038 WSCD1Q658N2 575 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 YAF2Q8IY57 180 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 EFCAB13Q8IY85 973 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 C2orf15Q8WU43 125 aaKnown RBP18.35■□□□□ 0.53
SCAF1-204ENST00000601038 RSPRY1Q96DX4 576 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 IER2Q9BTL4 223 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 CHRDQ9H2X0 955 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 ATXN3LQ9H3M9 355 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 PRMT8Q9NR22 394 aaPredicted RBP18.35■□□□□ 0.53
SCAF1-204ENST00000601038 OLFML3Q9NRN5 406 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 TBC1D7Q9P0N9 293 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 PCDHB13Q9Y5F0 798 aa18.35■□□□□ 0.53
SCAF1-204ENST00000601038 GCNT3O95395 438 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 LDHAP00338 332 aaKnown RBP18.34■□□□□ 0.53
SCAF1-204ENST00000601038 GABRR2P28476 465 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 ALCAMQ13740 583 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 VEPH1Q14D04 833 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 MGAT5BQ3V5L5 792 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 SV2CQ496J9 727 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 ARHGAP15Q53QZ3 475 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 ERMP1Q7Z2K6 904 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 LRRTM3Q86VH5 581 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 SPPL2BQ8TCT7 592 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 CSGALNACT1Q8TDX6 532 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 ZNF560Q96MR9 790 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 SEPT5Q99719 369 aaPredicted RBP18.34■□□□□ 0.53
SCAF1-204ENST00000601038 HINFPQ9BQA5 517 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 FAM213AQ9BRX8 229 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 MKNK1Q9BUB5 465 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 FAM126AQ9BYI3 521 aaPredicted RBP18.34■□□□□ 0.53
SCAF1-204ENST00000601038 LMAN1LQ9HAT1 526 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 OBP2AQ9NY56 170 aa18.34■□□□□ 0.53
SCAF1-204ENST00000601038 TICRRQ7Z2Z1 1910 aa18.33■□□□□ 0.53
SCAF1-204ENST00000601038 TSC2P49815 1807 aa18.33■□□□□ 0.53
SCAF1-204ENST00000601038 COL4A2P08572 1712 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 FRMD3A2A2Y4 597 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 LILRB5O75023 590 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 IDEP14735 1019 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 ATF6P18850 670 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 GARTP22102 1010 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 CCNE1P24864 410 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 WEE1P30291 646 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 PNPLA4P41247 253 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 STAT6P42226 847 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 GPR158Q5T848 1215 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 C1orf228Q6PIY5 440 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 BRSK2Q8IWQ3 736 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 KIAA2013Q8IYS2 634 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 DCP1BQ8IZD4 617 aaKnown RBP18.33■□□□□ 0.52
SCAF1-204ENST00000601038 FAM200AQ8TCP9 573 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 MSANTD3Q96H12 275 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 USP28Q96RU2 1077 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 LPIN3Q9BQK8 851 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 PANK2Q9BZ23 570 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 ZSCAN16Q9H4T2 348 aaPredicted RBP18.33■□□□□ 0.52
SCAF1-204ENST00000601038 TASP1Q9H6P5 420 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 MTMR6Q9Y217 621 aa18.33■□□□□ 0.52
SCAF1-204ENST00000601038 DMDP11532 3685 aa18.32■□□□□ 0.52
SCAF1-204ENST00000601038 OTOGLQ3ZCN5 2332 aa18.32■□□□□ 0.52
SCAF1-204ENST00000601038 SPTBN4Q9H254 2564 aa18.32■□□□□ 0.52
SCAF1-204ENST00000601038 A0A087X0B3 334 aa18.32■□□□□ 0.52
SCAF1-204ENST00000601038 DPYSL4O14531 572 aa18.32■□□□□ 0.52
SCAF1-204ENST00000601038 HAPLN1P10915 354 aaPredicted RBP18.32■□□□□ 0.52
SCAF1-204ENST00000601038 CHRNB1P11230 501 aa18.32■□□□□ 0.52
SCAF1-204ENST00000601038 CDC25CP30307 473 aa18.32■□□□□ 0.52
SCAF1-204ENST00000601038 CASP5P51878 434 aa18.32■□□□□ 0.52
SCAF1-204ENST00000601038 WNT7BP56706 349 aa18.32■□□□□ 0.52
SCAF1-204ENST00000601038 TFAMQ00059 246 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms