RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 TBC1D4O60343 1298 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 TACC1O75410 805 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 OAZ2O95190 189 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 P4HA1P13674 534 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 RPL17P18621 184 aaKnown RBP21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 MYO9BQ13459 2157 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 CUL2Q13617 745 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 ADGRE1Q14246 886 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 PSMD5Q16401 504 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 OVOS1Q6IE37 1185 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 METTL23Q86XA0 190 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 PPM1KQ8N3J5 372 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 OR10T2Q8NGX3 314 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 TMEM209Q96SK2 561 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 GANQ9H2C0 597 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 CYP3A43Q9HB55 503 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 MRPL17Q9NRX2 175 aaKnown RBP21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 MTRRQ9UBK8 725 aa21.42■■□□□ 1.02
SHKBP1-222ENST00000600320 C2orf71A6NGG8 1288 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 ADAM12O43184 909 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 NOL4O94818 638 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 CA8P35219 290 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 PLCB2Q00722 1185 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 SMC1AQ14683 1233 aaKnown RBP21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 CTXN3Q4LDR2 81 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 SARM1Q6SZW1 724 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 ANKS3Q6ZW76 656 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 TMEM86AQ8N2M4 240 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 UBR7Q8N806 425 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 MRPL43Q8N983 215 aaKnown RBP21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 MICAL1Q8TDZ2 1067 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 FAXDC2Q96IV6 333 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 RXFP1Q9HBX9 757 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 UBE2TQ9NPD8 197 aaPredicted RBP21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 NGRNQ9NPE2 291 aaKnown RBP21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 DDX43Q9NXZ2 648 aaKnown RBP21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 APEX2Q9UBZ4 518 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 HMGXB4Q9UGU5 601 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 FBXL5Q9UKA1 691 aa21.41■■□□□ 1.02
SHKBP1-222ENST00000600320 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 FAM163BP0C2L3 166 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 CD58P19256 250 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 ACAT1P24752 427 aaKnown RBP21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 LMO2P25791 158 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 PBX1P40424 430 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 UVSSAQ2YD98 709 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 KLHDC7AQ5VTJ3 777 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 IQCEQ6IPM2 695 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 ZNF280DQ6N043 979 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 GPR153Q6NV75 609 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 ADGRD2Q7Z7M1 963 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 GPR65Q8IYL9 337 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 OR6B3Q8NGW1 331 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 SPATA18Q8TC71 538 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 MRPL38Q96DV4 380 aaKnown RBP21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 PCMTD1Q96MG8 357 aaPredicted RBP21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 TWNKQ96RR1 684 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 PLCB1Q9NQ66 1216 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 FAM207AQ9NSI2 230 aaPredicted RBP21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 DNAJC12Q9UKB3 198 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 BACE2Q9Y5Z0 518 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 FHOD1Q9Y613 1164 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 IRAK3Q9Y616 596 aa21.4■■□□□ 1.02
SHKBP1-222ENST00000600320 MYO7AQ13402 2215 aa21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 A0A1W2PQC6 194 aa21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 H7C4K7 107 aa21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 CNPP09543 421 aaKnown RBP21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 PDGFRBP09619 1106 aa21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 OR4Q2P0C623 313 aa21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 ACO1P21399 889 aaKnown RBP21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 TBXAS1P24557 533 aaPredicted RBP21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 GCNT1Q02742 428 aa21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 PTPROQ16827 1216 aa21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 CCDC142Q17RM4 750 aa21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 PDE12Q6L8Q7 609 aaKnown RBP21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 GLYCTKQ8IVS8 523 aa21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 WHAMMQ8TF30 809 aa21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 KLHL5Q96PQ7 755 aa21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 CLSTN3Q9BQT9 956 aa21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 SNX25Q9H3E2 840 aa21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 CISHQ9NSE2 258 aa21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 SSX2IPQ9Y2D8 614 aa21.39■■□□□ 1.01
SHKBP1-222ENST00000600320 CHD9Q3L8U1 2897 aa21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 TEX28O15482 410 aa21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 CILPO75339 1184 aa21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 GNL1P36915 607 aaPredicted RBP21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 LHX1P48742 406 aa21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 NDST1P52848 882 aa21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 INCA1Q0VD86 236 aa21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 ORC1Q13415 861 aa21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 PDXDC1Q6P996 788 aa21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 THEM5Q8N1Q8 247 aa21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 NAA15Q9BXJ9 866 aaKnown RBP21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 ELOVL4Q9GZR5 314 aa21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 DPEP3Q9H4B8 488 aa21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 STXBP5LQ9Y2K9 1186 aa21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 CDY1Q9Y6F8 540 aa21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 LAMA2P24043 3122 aaKnown RBP21.38■■□□□ 1.01
SHKBP1-222ENST00000600320 A8MXQ7 604 aa21.37■■□□□ 1.01
SHKBP1-222ENST00000600320 CBFA2T2O43439 604 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms