RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 DPCR1Q3MIW9 517 aa20.96■□□□□ 0.95
SHKBP1-221ENST00000599833 ADAMTS19Q8TE59 1207 aa20.96■□□□□ 0.95
SHKBP1-221ENST00000599833 COL25A1Q9BXS0 654 aaPredicted RBP20.96■□□□□ 0.95
SHKBP1-221ENST00000599833 OXCT2Q9BYC2 517 aaPredicted RBP20.96■□□□□ 0.95
SHKBP1-221ENST00000599833 ZCWPW1Q9H0M4 648 aa20.96■□□□□ 0.95
SHKBP1-221ENST00000599833 POMKQ9H5K3 350 aa20.96■□□□□ 0.95
SHKBP1-221ENST00000599833 ZDHHC7Q9NXF8 308 aa20.96■□□□□ 0.95
SHKBP1-221ENST00000599833 DSEQ9UL01 958 aa20.96■□□□□ 0.95
SHKBP1-221ENST00000599833 ARHGEF37A1IGU5 675 aa20.95■□□□□ 0.94
SHKBP1-221ENST00000599833 C19orf67A6NJJ6 358 aa20.95■□□□□ 0.94
SHKBP1-221ENST00000599833 C8AP07357 584 aa20.95■□□□□ 0.94
SHKBP1-221ENST00000599833 GCLMP48507 274 aa20.95■□□□□ 0.94
SHKBP1-221ENST00000599833 ZP2Q05996 745 aa20.95■□□□□ 0.94
SHKBP1-221ENST00000599833 NCOA4Q13772 614 aa20.95■□□□□ 0.94
SHKBP1-221ENST00000599833 CBX2Q14781 532 aaPredicted RBP20.95■□□□□ 0.94
SHKBP1-221ENST00000599833 TPGS2Q68CL5 300 aa20.95■□□□□ 0.94
SHKBP1-221ENST00000599833 DPH6Q7L8W6 267 aa20.95■□□□□ 0.94
SHKBP1-221ENST00000599833 FILIP1Q7Z7B0 1213 aa20.95■□□□□ 0.94
SHKBP1-221ENST00000599833 TCEAL8Q8IYN2 117 aa20.95■□□□□ 0.94
SHKBP1-221ENST00000599833 CEP63Q96MT8 703 aa20.95■□□□□ 0.94
SHKBP1-221ENST00000599833 TMLHEQ9NVH6 421 aa20.95■□□□□ 0.94
SHKBP1-221ENST00000599833 AFF4Q9UHB7 1163 aaKnown RBP20.95■□□□□ 0.94
SHKBP1-221ENST00000599833 CCDC195A0A1B0GUA6 201 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 GOLGA6L22H0YM25 854 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 POU2F2P09086 479 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 HOXA9P31269 272 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 ATICP31939 592 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 MARSP56192 900 aaKnown RBP20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 ARPP19P56211 112 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 MYO1EQ12965 1108 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 GPR17Q13304 367 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 CCDC142Q17RM4 750 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 USP37Q86T82 979 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 TMEM86AQ8N2M4 240 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 MLKLQ8NB16 471 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 SLC7A14Q8TBB6 771 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 SPATA18Q8TC71 538 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 TAS1R2Q8TE23 839 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 SLC35C1Q96A29 364 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 PRKD2Q9BZL6 878 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 SDCBP2Q9H190 292 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 RWDD2AQ9UIY3 292 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 POLIQ9UNA4 740 aa20.94■□□□□ 0.94
SHKBP1-221ENST00000599833 MTMR11A4FU01 709 aa20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 ASS1P00966 412 aaKnown RBP20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 HLA-DRAP01903 254 aa20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 EPB41P11171 864 aaKnown RBP20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 GTF2H1P32780 548 aa20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 NLRP12P59046 1061 aa20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 UVSSAQ2YD98 709 aa20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 CBWD6Q4V339 395 aa20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 CBWD3Q5JTY5 395 aa20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 CBWD5Q5RIA9 395 aa20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 IRF2BP1Q8IU81 584 aa20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 ADGRF2Q8IZF7 708 aa20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 TTC9BQ8N6N2 239 aa20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 SEMA4DQ92854 862 aa20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 MRPL45Q9BRJ2 306 aaKnown RBP20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 APOBEC3GQ9HC16 384 aaKnown RBP20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 TMEM8AQ9HCN3 771 aa20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 TMEM63CQ9P1W3 806 aa20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 PRKAG3Q9UGI9 489 aa20.93■□□□□ 0.94
SHKBP1-221ENST00000599833 BICDL2A1A5D9 508 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 LOC730098B7Z3J9 87 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 HUS1O60921 280 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 TACC1O75410 805 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 MBD3O95983 291 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 KRT13P13646 458 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 WARSP23381 471 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 LMO2P25791 158 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 ADCY1Q08828 1119 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 BIRC3Q13489 604 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 SPOPLQ6IQ16 392 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 CYP26C1Q6V0L0 522 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 RTL10Q7L3V2 364 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 FRMD5Q7Z6J6 570 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 ADHFE1Q8IWW8 467 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 SYAP1Q96A49 352 aaPredicted RBP20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 ACBD6Q9BR61 282 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 DPP7Q9UHL4 492 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 MAFFQ9ULX9 164 aa20.92■□□□□ 0.94
SHKBP1-221ENST00000599833 NRG2O14511 850 aaPredicted RBP20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 N4BP1O75113 896 aaKnown RBP20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 HNRNPA1P09651 372 aaKnown RBP eCLIP20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 CPB1P15086 417 aa20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 MTHFRP42898 656 aa20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 ZNF699Q32M78 642 aa20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 WDR72Q3MJ13 1102 aa20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 METTL23Q86XA0 190 aa20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 ATAD1Q8NBU5 361 aa20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 PGLYRP2Q96PD5 576 aa20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 UHRF1Q96T88 793 aaPredicted RBP20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 PI4K2AQ9BTU6 479 aa20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 PHF7Q9BWX1 381 aaPredicted RBP20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 SMYD3Q9H7B4 428 aa20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 DDX43Q9NXZ2 648 aaKnown RBP20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 COQ4Q9Y3A0 265 aa20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 INSL5Q9Y5Q6 135 aa20.91■□□□□ 0.94
SHKBP1-221ENST00000599833 FAM163BP0C2L3 166 aa20.9■□□□□ 0.94
SHKBP1-221ENST00000599833 ACAT1P24752 427 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms