RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 TRIM17Q9Y577 477 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 ANKRD63C9JTQ0 380 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 NEMP1O14524 444 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 ZNF189O75820 626 aaPredicted RBP15.5■□□□□ 0.07
SYMPK-213ENST00000599460 BYSLQ13895 437 aaKnown RBP15.5■□□□□ 0.07
SYMPK-213ENST00000599460 PTGISQ16647 500 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 SLC51AQ86UW1 340 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 ATPAF2Q8N5M1 289 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 ETNPPLQ8TBG4 499 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 USP33Q8TEY7 942 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 SLC20A1Q8WUM9 679 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 ACSF2Q96CM8 615 aaPredicted RBP15.5■□□□□ 0.07
SYMPK-213ENST00000599460 LRRC37A3O60309 1634 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 RGPD2P0DJD1 1756 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 ATP9BO43861 1147 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 ATP9AO75110 1047 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 ZNF571Q7Z3V5 609 aaPredicted RBP15.5■□□□□ 0.07
SYMPK-213ENST00000599460 TMEM169Q96HH4 297 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 VPS11Q9H270 941 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 BCAP29Q9UHQ4 241 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.5■□□□□ 0.07
SYMPK-213ENST00000599460 CAPN7Q9Y6W3 813 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 FAM237AA0A1B0GTK4 181 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 CASTOR2A6NHX0 329 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 HOXA2O43364 376 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 KCNA1Q09470 495 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 EPM2AIP1Q7L775 607 aaPredicted RBP15.5■□□□□ 0.07
SYMPK-213ENST00000599460 ANKMY2Q8IV38 441 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 ELMO3Q96BJ8 720 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 RMDN1Q96DB5 314 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 CYFIP2Q96F07 1278 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 AGAP3Q96P47 875 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 TRAIPQ9BWF2 469 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.5■□□□□ 0.07
SYMPK-213ENST00000599460 DUSP10Q9Y6W6 482 aa15.5■□□□□ 0.07
SYMPK-213ENST00000599460 CCDC160A6NGH7 325 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 SPATA31C2B4DYI2 1134 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 NR1H3Q13133 447 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 MKRN4PQ13434 485 aaPredicted RBP15.49■□□□□ 0.07
SYMPK-213ENST00000599460 C10orf120Q5SQS8 335 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 ATG16L1Q676U5 607 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 DEFB128Q7Z7B8 93 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 ZNF384Q8TF68 577 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 ARHGEF26Q96DR7 871 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 TMEM176AQ96HP8 235 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 FARP1Q9Y4F1 1045 aaPredicted RBP15.49■□□□□ 0.07
SYMPK-213ENST00000599460 TISP43B9A030 160 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 CST8O60676 142 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 GHRP10912 638 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 ACO1P21399 889 aaKnown RBP15.49■□□□□ 0.07
SYMPK-213ENST00000599460 STX1BP61266 288 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 MAGOHP61326 146 aaKnown RBP15.49■□□□□ 0.07
SYMPK-213ENST00000599460 ASAP3Q8TDY4 903 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 PPP2R3CQ969Q6 453 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 SLITRK1Q96PX8 696 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 HMX1Q9NP08 348 aaPredicted RBP15.49■□□□□ 0.07
SYMPK-213ENST00000599460 AAASQ9NRG9 546 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 BAIAP2L1Q9UHR4 511 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 PQBP1O60828 265 aaKnown RBP15.49■□□□□ 0.07
SYMPK-213ENST00000599460 FBXO47Q5MNV8 452 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 TDRD10Q5VZ19 366 aaKnown RBP15.49■□□□□ 0.07
SYMPK-213ENST00000599460 WNT7AO00755 349 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 PRAMEP78395 509 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 MAP2K5Q13163 448 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 SPARCL1Q14515 664 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 YAF2Q8IY57 180 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 GLIS3Q8NEA6 775 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 SPATA18Q8TC71 538 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 SLC35C1Q96A29 364 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 ASIC4Q96FT7 647 aa15.49■□□□□ 0.07
SYMPK-213ENST00000599460 POMCP01189 267 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 TAC1P20366 129 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 CASP5P51878 434 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 GYS2P54840 703 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 SESN2P58004 480 aaPredicted RBP15.48■□□□□ 0.07
SYMPK-213ENST00000599460 USP38Q8NB14 1042 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 SCG3Q8WXD2 468 aaKnown RBP15.48■□□□□ 0.07
SYMPK-213ENST00000599460 CYP3A43Q9HB55 503 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.48■□□□□ 0.071e-7■□□□□ 9.6
SYMPK-213ENST00000599460 INTS13Q9NVM9 706 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 ARHGAP20Q9P2F6 1191 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 SPDYE5A6NIY4 337 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 LRRIQ3A6PVS8 624 aaPredicted RBP15.48■□□□□ 0.07
SYMPK-213ENST00000599460 H7C4K7 107 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 CTIFO43310 598 aaKnown RBP15.48■□□□□ 0.07
SYMPK-213ENST00000599460 APRTP07741 180 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 HOXC6P09630 235 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 ZNF280AP59817 542 aaPredicted RBP15.48■□□□□ 0.07
SYMPK-213ENST00000599460 ARHGEF19Q8IW93 802 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 RAB6BQ9NRW1 208 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 MX2P20592 715 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 RAD51Q06609 339 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 DEFB115Q30KQ5 88 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 OR6P1Q8NGX9 317 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 COG1Q8WTW3 980 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 RUBCNQ92622 972 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 LACTBL1A8MY62 500 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 M0QYT0 321 aa15.48■□□□□ 0.07
SYMPK-213ENST00000599460 NSUN2Q08J23 767 aaKnown RBP eCLIP15.48■□□□□ 0.07
SYMPK-213ENST00000599460 SKIV2LQ15477 1246 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms