RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 ZNF560Q96MR9 790 aa12.99□□□□□ -0.33
ZNF548-209ENST00000598895 PGLYRP2Q96PD5 576 aa12.99□□□□□ -0.33
ZNF548-209ENST00000598895 CGRRF1Q99675 332 aa12.99□□□□□ -0.33
ZNF548-209ENST00000598895 BPIFA3Q9BQP9 254 aa12.99□□□□□ -0.33
ZNF548-209ENST00000598895 CYP4F11Q9HBI6 524 aa12.99□□□□□ -0.33
ZNF548-209ENST00000598895 KCND1Q9NSA2 647 aa12.99□□□□□ -0.33
ZNF548-209ENST00000598895 SIX4Q9UIU6 781 aa12.99□□□□□ -0.33
ZNF548-209ENST00000598895 HOOK1Q9UJC3 728 aaKnown RBP12.99□□□□□ -0.33
ZNF548-209ENST00000598895 ITGA11Q9UKX5 1188 aa12.99□□□□□ -0.33
ZNF548-209ENST00000598895 SPTBN5Q9NRC6 3674 aaKnown RBP12.99□□□□□ -0.33
ZNF548-209ENST00000598895 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 LRRIQ3A6PVS8 624 aaPredicted RBP12.98□□□□□ -0.33
ZNF548-209ENST00000598895 BIN1O00499 593 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 PRRG1O14668 218 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 SEC24AO95486 1093 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 TNNT1P13805 278 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 NR2F2P24468 414 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 ELF1P32519 619 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 PRCPP42785 496 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 DLG4P78352 724 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 NTHL1P78549 312 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 RBP5P82980 135 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 TPD52L1Q16890 204 aaPredicted RBP12.98□□□□□ -0.33
ZNF548-209ENST00000598895 DUOXA2Q1HG44 320 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 ZNF658Q5TYW1 1059 aaPredicted RBP12.98□□□□□ -0.33
ZNF548-209ENST00000598895 WSCD1Q658N2 575 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 TRAPPC11Q7Z392 1133 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 METTL23Q86XA0 190 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 ZNF461Q8TAF7 563 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 CXorf38Q8TB03 319 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 HDAC7Q8WUI4 952 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 ELMO3Q96BJ8 720 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 EEF2KMTQ96G04 330 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 BORCS6Q96GS4 357 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 MFSD14AQ96MC6 490 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 NECTIN4Q96NY8 510 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 GSDMAQ96QA5 445 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 PRKD2Q9BZL6 878 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 DMAC2Q9NW81 257 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 ZDHHC7Q9NXF8 308 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 MAN1B1Q9UKM7 699 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 TRAF3IP3Q9Y228 551 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 SNX9Q9Y5X1 595 aa12.98□□□□□ -0.33
ZNF548-209ENST00000598895 C2CD4DB7Z1M9 353 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 LOC730098B7Z3J9 87 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 PHACTR2O75167 634 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 ABLIM3O94929 683 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 OAZ2O95190 189 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 CST3P01034 146 aaPredicted RBP12.97□□□□□ -0.33
ZNF548-209ENST00000598895 TYMPP19971 482 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 PNPLA4P41247 253 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 ADCY1Q08828 1119 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 BIRC3Q13489 604 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 C15orf39Q6ZRI6 1047 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 CCDC149Q6ZUS6 474 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 GRASPQ7Z6J2 395 aaPredicted RBP12.97□□□□□ -0.33
ZNF548-209ENST00000598895 RNF135Q8IUD6 432 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 SLC9A9Q8IVB4 645 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 LRRC52Q8N7C0 313 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 CCDC112Q8NEF3 446 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 CMASQ8NFW8 434 aaPredicted RBP12.97□□□□□ -0.33
ZNF548-209ENST00000598895 OR10T2Q8NGX3 314 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 HPDLQ96IR7 371 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 HCFC1R1Q9NWW0 138 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 L1RE1Q9UN81 338 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 FRMD4BQ9Y2L6 1034 aa12.97□□□□□ -0.33
ZNF548-209ENST00000598895 CLUHO75153 1309 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 TRIM49BA6NDI0 452 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 HCRTO43612 131 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 HUS1O60921 280 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 AKAP3O75969 853 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 LRG1P02750 347 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 CYP11A1P05108 521 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 ATF2P15336 505 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 ACAT1P24752 427 aaKnown RBP12.96□□□□□ -0.33
ZNF548-209ENST00000598895 GBP2P32456 591 aaPredicted RBP12.96□□□□□ -0.33
ZNF548-209ENST00000598895 MYO1EQ12965 1108 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 SLC39A12Q504Y0 691 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 GET4Q7L5D6 327 aaPredicted RBP12.96□□□□□ -0.33
ZNF548-209ENST00000598895 LRRC8AQ8IWT6 810 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 THEM5Q8N1Q8 247 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 TDRD5Q8NAT2 981 aaKnown RBP12.96□□□□□ -0.33
ZNF548-209ENST00000598895 CCDC150Q8NCX0 1101 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 ST13P5Q8NFI4 369 aaPredicted RBP12.96□□□□□ -0.33
ZNF548-209ENST00000598895 SPATA20Q8TB22 786 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 PARD3BQ8TEW8 1205 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 PKNOX2Q96KN3 472 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 RTP3Q9BQQ7 232 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 EPHX3Q9H6B9 360 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 MMRN2Q9H8L6 949 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 MUTYHQ9UIF7 546 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 DSEQ9UL01 958 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 SLC27A5Q9Y2P5 690 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 INSL5Q9Y5Q6 135 aa12.96□□□□□ -0.33
ZNF548-209ENST00000598895 ARHGEF37A1IGU5 675 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 OR6C75A6NL08 312 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 CCP110O43303 1012 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 SOAT2O75908 522 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 VNN2O95498 520 aa12.95□□□□□ -0.34
ZNF548-209ENST00000598895 C1RP00736 705 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms