RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 COL19A1Q14993 1142 aa16.18■□□□□ 0.18
GTF2F1-206ENST00000598607 SOWAHAQ2M3V2 549 aa16.18■□□□□ 0.18
GTF2F1-206ENST00000598607 TCP11X2Q5H9J9 407 aa16.18■□□□□ 0.18
GTF2F1-206ENST00000598607 LIMS2Q7Z4I7 341 aa16.18■□□□□ 0.18
GTF2F1-206ENST00000598607 ADGRF2Q8IZF7 708 aa16.18■□□□□ 0.18
GTF2F1-206ENST00000598607 AOPEPQ8N6M6 819 aa16.18■□□□□ 0.18
GTF2F1-206ENST00000598607 CLDND1Q9NY35 253 aa16.18■□□□□ 0.18
GTF2F1-206ENST00000598607 COG5Q9UP83 839 aa16.18■□□□□ 0.18
GTF2F1-206ENST00000598607 C2orf16Q68DN1 1984 aa16.18■□□□□ 0.18
GTF2F1-206ENST00000598607 BRWD1Q9NSI6 2320 aa16.18■□□□□ 0.18
GTF2F1-206ENST00000598607 BECN2A8MW95 431 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 CPB1P15086 417 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 WARSP23381 471 aaKnown RBP16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 PCSK1P29120 753 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 ROR1Q01973 937 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 KCNC3Q14003 757 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 CTC1Q2NKJ3 1217 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 HSP90AA4PQ58FG1 418 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 CDKAL1Q5VV42 579 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 TPGS2Q68CL5 300 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 TMEM184AQ6ZMB5 413 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 EP400NLQ6ZTU2 488 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 PALB2Q86YC2 1186 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 SLC22A17Q8WUG5 538 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 HDAC7Q8WUI4 952 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 TUBGCP2Q9BSJ2 902 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 PLEKHA4Q9H4M7 779 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 DZANK1Q9NVP4 752 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 FANCLQ9NW38 375 aa16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 DDX43Q9NXZ2 648 aaKnown RBP16.17■□□□□ 0.18
GTF2F1-206ENST00000598607 GABRDO14764 452 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 TGM5O43548 720 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 CDK11BP21127 795 aaKnown RBP16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 ARPP19P56211 112 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 TPM4P67936 248 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 TSPY1Q01534 308 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 NCAPHQ15003 741 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 SPOPLQ6IQ16 392 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 LLGL2Q6P1M3 1020 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 RSPO2Q6UXX9 243 aaPredicted RBP16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 DCP1BQ8IZD4 617 aaKnown RBP16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 ZNF461Q8TAF7 563 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 SEMA4DQ92854 862 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 HLA-CQ95604 372 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 ACBD6Q9BR61 282 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 PI4K2AQ9BTU6 479 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 NIF3L1Q9GZT8 377 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 SNX25Q9H3E2 840 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 FAM124BQ9H5Z6 455 aaPredicted RBP16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 CYP3A43Q9HB55 503 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 MAFFQ9ULX9 164 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 POLIQ9UNA4 740 aa16.16■□□□□ 0.18
GTF2F1-206ENST00000598607 GTPBP10A4D1E9 387 aaKnown RBP16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 SPDYE4A6NLX3 237 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 LINC01565O15544 149 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 ADAM12O43184 909 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 GLP2RO95838 553 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 EPCAMP16422 314 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 HOXB8P17481 243 aaPredicted RBP16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 TRIM21P19474 475 aaKnown RBP16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 ELF1P32519 619 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 SMARCB1Q12824 385 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 GPR17Q13304 367 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 VWA3BQ502W6 1294 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 LILRA6Q6PI73 481 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 LRSAM1Q6UWE0 723 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 SCARA5Q6ZMJ2 495 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 RTL10Q7L3V2 364 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 DHX40Q8IX18 779 aaKnown RBP16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 TTC39CQ8N584 583 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 OR6B3Q8NGW1 331 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 KBTBD7Q8WVZ9 684 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 NT5C1BQ96P26 610 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 BCO2Q9BYV7 579 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 DNAI2Q9GZS0 605 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 ZCWPW1Q9H0M4 648 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 NDST4Q9H3R1 872 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 UBE2ZQ9H832 354 aaPredicted RBP16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 MAN1C1Q9NR34 630 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 FBXW11Q9UKB1 542 aa16.15■□□□□ 0.18
GTF2F1-206ENST00000598607 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 WDR27A2RRH5 827 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 PES1O00541 588 aaKnown RBP16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 ABLIM3O94929 683 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 ATF2P15336 505 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 TBXAS1P24557 533 aaPredicted RBP16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 GNL1P36915 607 aaPredicted RBP16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 ASPAP45381 313 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 YWHAEP62258 255 aaKnown RBP16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 LIN9Q5TKA1 542 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 ANKRD54Q6NXT1 300 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 GBP6Q6ZN66 633 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 CCDC149Q6ZUS6 474 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 OSTM1Q86WC4 334 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 KREMEN2Q8NCW0 462 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 EHBP1Q8NDI1 1231 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 VN1R2Q8NFZ6 395 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 OR10T2Q8NGX3 314 aa16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 C2orf15Q8WU43 125 aaKnown RBP16.14■□□□□ 0.17
GTF2F1-206ENST00000598607 RTP3Q9BQQ7 232 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms