RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 PHLDB3Q6NSJ2 640 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 DNAJB7Q7Z6W7 309 aaPredicted RBP16.25■□□□□ 0.19
LIG1-215ENST00000597901 CBWD2Q8IUF1 395 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 LEMD2Q8NC56 503 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 SCFD1Q8WVM8 642 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 CHAMP1Q96JM3 812 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 FAM84AQ96KN4 292 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 PHOX2BQ99453 314 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 DNAJC25Q9H1X3 360 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 KIAA1586Q9HCI6 787 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 ASAH2Q9NR71 780 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 ARHGEF3Q9NR81 526 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 HSPBP1Q9NZL4 362 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 HSFX1Q9UBD0 423 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 ZNF318Q5VUA4 2279 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 CDR1P51861 262 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 STARD6P59095 220 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 SNRPFP62306 86 aaKnown RBP16.24■□□□□ 0.19
LIG1-215ENST00000597901 SNW1Q13573 536 aaKnown RBP16.24■□□□□ 0.19
LIG1-215ENST00000597901 SURF1Q15526 300 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 GRAMD1CQ8IYS0 662 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 CEP57L1Q8IYX8 460 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 TTC9BQ8N6N2 239 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 LRRC52Q8N7C0 313 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 RDH13Q8NBN7 331 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 LEO1Q8WVC0 666 aaPredicted RBP16.24■□□□□ 0.19
LIG1-215ENST00000597901 ELSPBP1Q96BH3 223 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 PAGE5Q96GU1 130 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 SHDQ96IW2 340 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 ZNF560Q96MR9 790 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 TBC1D17Q9HA65 648 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 ZFP14Q9HCL3 533 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 SLC39A2Q9NP94 309 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 INTS13Q9NVM9 706 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 ITGA11Q9UKX5 1188 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 ASB3Q9Y575 518 aa16.24■□□□□ 0.19
LIG1-215ENST00000597901 DOCK6Q96HP0 2047 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 A0A1B0GVL5 298 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 CLIC2O15247 247 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 HUS1O60921 280 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 SOAT2O75908 522 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 KRT19P08727 400 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 SMARCB1Q12824 385 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 TEAD2Q15562 447 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 DUOXA2Q1HG44 320 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 LMBRD2Q68DH5 695 aaPredicted RBP16.23■□□□□ 0.19
LIG1-215ENST00000597901 NELFCDQ8IXH7 590 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 DCP1BQ8IZD4 617 aaKnown RBP16.23■□□□□ 0.19
LIG1-215ENST00000597901 PDCL2Q8N4E4 241 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 DTWD2Q8NBA8 298 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 OR5B17Q8NGF7 314 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 SHKBP1Q8TBC3 707 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 SMARCD2Q92925 531 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 SPATA32Q96LK8 384 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 ASB16Q96NS5 453 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 GPR88Q9GZN0 384 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 AGPAT3Q9NRZ7 376 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 GDAP2Q9NXN4 497 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 SIX4Q9UIU6 781 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 SIT1Q9Y3P8 196 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 ZDBF2Q9HCK1 2354 aa16.23■□□□□ 0.19
LIG1-215ENST00000597901 ACTN4O43707 911 aaKnown RBP16.22■□□□□ 0.19
LIG1-215ENST00000597901 TMEM191BP0C7N4 346 aa16.22■□□□□ 0.19
LIG1-215ENST00000597901 FCARP24071 287 aa16.22■□□□□ 0.19
LIG1-215ENST00000597901 KRT85P78386 507 aa16.22■□□□□ 0.19
LIG1-215ENST00000597901 PFKPQ01813 784 aa16.22■□□□□ 0.19
LIG1-215ENST00000597901 BFSP1Q12934 665 aa16.22■□□□□ 0.19
LIG1-215ENST00000597901 MGAT5BQ3V5L5 792 aa16.22■□□□□ 0.19
LIG1-215ENST00000597901 TMC8Q8IU68 726 aa16.22■□□□□ 0.19
LIG1-215ENST00000597901 CCDC105Q8IYK2 499 aa16.22■□□□□ 0.19
LIG1-215ENST00000597901 C2orf15Q8WU43 125 aaKnown RBP16.22■□□□□ 0.19
LIG1-215ENST00000597901 PSMG2Q969U7 264 aa16.22■□□□□ 0.19
LIG1-215ENST00000597901 ANKRD36BP1Q96IX9 119 aa16.22■□□□□ 0.19
LIG1-215ENST00000597901 MTMR12Q9C0I1 747 aa16.22■□□□□ 0.19
LIG1-215ENST00000597901 FAM86C1Q9NVL1 165 aa16.22■□□□□ 0.19
LIG1-215ENST00000597901 L1RE1Q9UN81 338 aa16.22■□□□□ 0.19
LIG1-215ENST00000597901 R3HCC1Q9Y3T6 440 aaKnown RBP16.22■□□□□ 0.19
LIG1-215ENST00000597901 SNX9Q9Y5X1 595 aa16.22■□□□□ 0.19
LIG1-215ENST00000597901 DOCK8Q8NF50 2099 aa16.22■□□□□ 0.19
LIG1-215ENST00000597901 NOTCH4Q99466 2003 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 A0A1W2PRU2 124 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 KLRC4O43908 158 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 TNNC2P02585 160 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 HAPLN1P10915 354 aaPredicted RBP16.21■□□□□ 0.19
LIG1-215ENST00000597901 PFKFB1P16118 471 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 VIPR2P41587 438 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 PRKCQQ04759 706 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 MLF2Q15773 248 aaPredicted RBP16.21■□□□□ 0.19
LIG1-215ENST00000597901 SNRNP35Q16560 246 aaKnown RBP16.21■□□□□ 0.19
LIG1-215ENST00000597901 KNOP1Q1ED39 458 aaKnown RBP16.21■□□□□ 0.19
LIG1-215ENST00000597901 BMT2Q1RMZ1 405 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 HS2ST1Q7LGA3 356 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 ITIH5Q86UX2 942 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 TMEM86AQ8N2M4 240 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 XXYLT1Q8NBI6 393 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 ZSCAN18Q8TBC5 510 aaPredicted RBP16.21■□□□□ 0.19
LIG1-215ENST00000597901 FAM200AQ8TCP9 573 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 SPPL2BQ8TCT7 592 aa16.21■□□□□ 0.19
LIG1-215ENST00000597901 SEPT5Q99719 369 aaPredicted RBP16.21■□□□□ 0.19
LIG1-215ENST00000597901 ACBD6Q9BR61 282 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms