RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 CLDN23Q96B33 292 aa16.39■□□□□ 0.21
TGFB1-202ENST00000597453 RSPRY1Q96DX4 576 aa16.39■□□□□ 0.21
TGFB1-202ENST00000597453 FGFBP2Q9BYJ0 223 aa16.39■□□□□ 0.21
TGFB1-202ENST00000597453 MRPL44Q9H9J2 332 aaKnown RBP16.39■□□□□ 0.21
TGFB1-202ENST00000597453 TRPV4Q9HBA0 871 aa16.39■□□□□ 0.21
TGFB1-202ENST00000597453 ZNF334Q9HCZ1 680 aaPredicted RBP16.39■□□□□ 0.21
TGFB1-202ENST00000597453 DPP3Q9NY33 737 aa16.39■□□□□ 0.21
TGFB1-202ENST00000597453 DNAH14Q0VDD8 3507 aa16.39■□□□□ 0.21
TGFB1-202ENST00000597453 LMNAP02545 664 aaKnown RBP16.38■□□□□ 0.21
TGFB1-202ENST00000597453 GAP43P17677 238 aa16.38■□□□□ 0.21
TGFB1-202ENST00000597453 PSMC3P17980 439 aa16.38■□□□□ 0.21
TGFB1-202ENST00000597453 PAX3P23760 479 aa16.38■□□□□ 0.21
TGFB1-202ENST00000597453 ALDH1A3P47895 512 aa16.38■□□□□ 0.21
TGFB1-202ENST00000597453 TAF6P49848 677 aa16.38■□□□□ 0.21
TGFB1-202ENST00000597453 EPHB3P54753 998 aa16.38■□□□□ 0.21
TGFB1-202ENST00000597453 ARMCX5Q6P1M9 558 aa16.38■□□□□ 0.21
TGFB1-202ENST00000597453 ZNF852Q6ZMS4 543 aa16.38■□□□□ 0.21
TGFB1-202ENST00000597453 SV2BQ7L1I2 683 aa16.38■□□□□ 0.21
TGFB1-202ENST00000597453 ZNF687Q8N1G0 1237 aa16.38■□□□□ 0.21
TGFB1-202ENST00000597453 SAAL1Q96ER3 474 aa16.38■□□□□ 0.21
TGFB1-202ENST00000597453 PYM1Q9BRP8 204 aaKnown RBP16.38■□□□□ 0.21
TGFB1-202ENST00000597453 PANK2Q9BZ23 570 aa16.38■□□□□ 0.21
TGFB1-202ENST00000597453 ZCWPW1Q9H0M4 648 aa16.38■□□□□ 0.21
TGFB1-202ENST00000597453 SEL1LQ9UBV2 794 aa16.38■□□□□ 0.21
TGFB1-202ENST00000597453 DENND4CQ5VZ89 1909 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 HEPACAM2A8MVW5 462 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 CYB561D2O14569 222 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 LAMTOR5O43504 91 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 GCNT3O95395 438 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 STAT6P42226 847 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 MAGEA9P43362 315 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 SLC39A12Q504Y0 691 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 L1TD1Q5T7N2 865 aaKnown RBP16.37■□□□□ 0.21
TGFB1-202ENST00000597453 ZC3H14Q6PJT7 736 aaKnown RBP16.37■□□□□ 0.21
TGFB1-202ENST00000597453 GAREM2Q75VX8 874 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 DNAJB7Q7Z6W7 309 aaPredicted RBP16.37■□□□□ 0.21
TGFB1-202ENST00000597453 GPIHBP1Q8IV16 184 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 MFSD6LQ8IWD5 586 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 DEPDC1BQ8WUY9 529 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 IRF7Q92985 503 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 PSMG2Q969U7 264 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 BORCS6Q96GS4 357 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 FAM84AQ96KN4 292 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 NELL2Q99435 816 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 LPIN3Q9BQK8 851 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 FAM213AQ9BRX8 229 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 MKNK1Q9BUB5 465 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 SEMA4AQ9H3S1 761 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 SLITRK6Q9H5Y7 841 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 ATP6V1DQ9Y5K8 247 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 FRYLO94915 3013 aa16.37■□□□□ 0.21
TGFB1-202ENST00000597453 OBSL1O75147 1896 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 KIF26AQ9ULI4 1882 aaPredicted RBP16.36■□□□□ 0.21
TGFB1-202ENST00000597453 FRMD3A2A2Y4 597 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 ARNTLO00327 626 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 CUTAO60888 179 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 IDEP14735 1019 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 ATF6P18850 670 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 POU5F1Q01860 360 aaKnown RBP16.36■□□□□ 0.21
TGFB1-202ENST00000597453 CSTF1Q05048 431 aaKnown RBP16.36■□□□□ 0.21
TGFB1-202ENST00000597453 POSTNQ15063 836 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 ZNF528Q3MIS6 628 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 WSCD1Q658N2 575 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 SCARA3Q6AZY7 606 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 CCDC73Q6ZRK6 1079 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 LRRTM3Q86VH5 581 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 ACCSQ96QU6 501 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 SEPT5Q99719 369 aaPredicted RBP16.36■□□□□ 0.21
TGFB1-202ENST00000597453 GPR88Q9GZN0 384 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 TRPV5Q9NQA5 729 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 OLFML3Q9NRN5 406 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 HSFX1Q9UBD0 423 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 FBXO4Q9UKT5 387 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 DSEQ9UL01 958 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 NDRG2Q9UN36 371 aaKnown RBP16.36■□□□□ 0.21
TGFB1-202ENST00000597453 EXOC7Q9UPT5 735 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 MRPS17Q9Y2R5 130 aaKnown RBP16.36■□□□□ 0.21
TGFB1-202ENST00000597453 ASB3Q9Y575 518 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 CEP250Q9BV73 2442 aa16.36■□□□□ 0.21
TGFB1-202ENST00000597453 ZNF263O14978 683 aa16.35■□□□□ 0.21
TGFB1-202ENST00000597453 IL18RAPO95256 599 aa16.35■□□□□ 0.21
TGFB1-202ENST00000597453 GABRR2P28476 465 aa16.35■□□□□ 0.21
TGFB1-202ENST00000597453 RPS9P46781 194 aaKnown RBP16.35■□□□□ 0.21
TGFB1-202ENST00000597453 KRT85P78386 507 aa16.35■□□□□ 0.21
TGFB1-202ENST00000597453 TSSK4Q6SA08 328 aa16.35■□□□□ 0.21
TGFB1-202ENST00000597453 METTL23Q86XA0 190 aa16.35■□□□□ 0.21
TGFB1-202ENST00000597453 NT5DC4Q86YG4 428 aa16.35■□□□□ 0.21
TGFB1-202ENST00000597453 BRSK2Q8IWQ3 736 aa16.35■□□□□ 0.21
TGFB1-202ENST00000597453 PDILTQ8N807 584 aa16.35■□□□□ 0.21
TGFB1-202ENST00000597453 LRRC3BQ96PB8 259 aa16.35■□□□□ 0.21
TGFB1-202ENST00000597453 CBWD1Q9BRT8 395 aa16.35■□□□□ 0.21
TGFB1-202ENST00000597453 RCOR1Q9UKL0 485 aa16.35■□□□□ 0.21
TGFB1-202ENST00000597453 PIAS3Q9Y6X2 628 aa16.35■□□□□ 0.21
TGFB1-202ENST00000597453 DMXL1Q9Y485 3027 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 GOLGA8IPA6NC78 632 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 GOLGA8JA6NMD2 632 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 KPNA7A9QM74 516 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 TULP1O00294 542 aaPredicted RBP16.34■□□□□ 0.21
TGFB1-202ENST00000597453 MAN2B1O00754 1011 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 NCAM2O15394 837 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms