RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 TMEM161AQ9NX61 479 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 KLK14Q9P0G3 267 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 CNTN3Q9P232 1028 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 GIT1Q9Y2X7 761 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 DERAQ9Y315 318 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 C2CD2Q9Y426 696 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 HIDE1A8MVS5 230 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 P4HA2O15460 535 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 AP5Z1O43299 807 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 HOXA2O43364 376 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 FGF18O76093 207 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 NFICP08651 508 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 MLH1P40692 756 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 PIK3CAP42336 1068 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 MTHFRP42898 656 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 GATMP50440 423 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 WNT7BP56706 349 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 CLDN10P78369 228 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 PPP3CAQ08209 521 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 DMWDQ09019 674 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 TDGQ13569 410 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 DUOXA2Q1HG44 320 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 LMBRD2Q68DH5 695 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 KRT39Q6A163 491 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 JADE1Q6IE81 842 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 CES5AQ6NT32 575 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 GLB1LQ6UWU2 654 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 GBP6Q6ZN66 633 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 NPAS4Q8IUM7 802 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 C1orf210Q8IVY1 113 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 DRC7Q8IY82 874 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 URGCPQ8TCY9 931 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 LPPQ93052 612 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 MTMR12Q9C0I1 747 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 ELAC1Q9H777 363 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 INTS13Q9NVM9 706 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 GCNT4Q9P109 453 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 NCDNQ9UBB6 729 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 R3HCC1Q9Y3T6 440 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 PCDHB7Q9Y5E2 793 aa12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 FNDC1Q4ZHG4 1894 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-213ENST00000597325 PTPRJQ12913 1337 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 ANK1P16157 1881 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 GTPBP10A4D1E9 387 aaKnown RBP12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 SOBPA7XYQ1 873 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 GOLGA6L6A8MZA4 724 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 WEE2P0C1S8 567 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 MCCD1P59942 119 aaPredicted RBP12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 NR1I3Q14994 352 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 EXOC3L4Q17RC7 722 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 CBWD6Q4V339 395 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 CBWD3Q5JTY5 395 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 GLRA4Q5JXX5 417 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 CBWD5Q5RIA9 395 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 C1orf220Q5T0J3 134 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 PLPP4Q5VZY2 271 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 AGMOQ6ZNB7 445 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 EFCAB13Q8IY85 973 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 ABI1Q8IZP0 508 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 CCDC150Q8NCX0 1101 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 BEST2Q8NFU1 509 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 CASP10Q92851 521 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 GAD1Q99259 594 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 IMPG2Q9BZV3 1241 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 TMEM117Q9H0C3 514 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 SLC38A7Q9NVC3 462 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 FBXL21Q9UKT6 434 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 INPP5FQ9Y2H2 1132 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 PCDHB12Q9Y5F1 795 aa12.96□□□□□ -0.33
SHKBP1-213ENST00000597325 CITO14578 2027 aa12.96□□□□□ -0.34
SHKBP1-213ENST00000597325 FREM2Q5SZK8 3169 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 A0A1W2PQC6 194 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 ARL5CA6NH57 179 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 MEIS3P2A8K0S8 358 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 PMM2O15305 246 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 TEX33O43247 280 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 TPM1P09493 284 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 KCNE1P15382 129 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 CDC25BP30305 580 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 FAM189BP81408 668 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 TRPC3Q13507 836 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 SYCP1Q15431 976 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 ZACNQ401N2 412 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 TDRD10Q5VZ19 366 aaKnown RBP12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 KIAA1841Q6NSI8 718 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 SV2AQ7L0J3 742 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 ZNF598Q86UK7 904 aaKnown RBP12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 FBXL13Q8NEE6 735 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 OR5B17Q8NGF7 314 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 RSPH1Q8WYR4 309 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 ZFP42Q96MM3 310 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 ERGIC2Q96RQ1 377 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 AAASQ9NRG9 546 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 WNT16Q9UBV4 365 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 ANGPTL2Q9UKU9 493 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 ITGA11Q9UKX5 1188 aa12.95□□□□□ -0.34
SHKBP1-213ENST00000597325 UBQLN1Q9UMX0 589 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms