RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 GTPBP10A4D1E9 387 aaKnown RBP15.38■□□□□ 0.05
VRK3-213ENST00000597215 GOLGA6L19H0YKK7 550 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 PER2O15055 1255 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 NCK2O43639 380 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 TBC1D4O60343 1298 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 CLASP2O75122 1294 aaKnown RBP15.38■□□□□ 0.05
VRK3-213ENST00000597215 TACC1O75410 805 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 WARSP23381 471 aaKnown RBP15.38■□□□□ 0.05
VRK3-213ENST00000597215 LHX1P48742 406 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 HYAL1Q12794 435 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 MIIPQ5JXC2 388 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 SLC8B1Q6J4K2 584 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 LUZP1Q86V48 1076 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 GLYCTKQ8IVS8 523 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 ELMO3Q96BJ8 720 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 NT5C1BQ96P26 610 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 CLSTN3Q9BQT9 956 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 SMYD3Q9H7B4 428 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 GCNT4Q9P109 453 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 LIMA1Q9UHB6 759 aaKnown RBP15.38■□□□□ 0.05
VRK3-213ENST00000597215 FBXL5Q9UKA1 691 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 STXBP5LQ9Y2K9 1186 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 CDY1Q9Y6F8 540 aa15.38■□□□□ 0.05
VRK3-213ENST00000597215 GABRDO14764 452 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 LRRN2O75325 713 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 GLUD1P00367 558 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 C1RP00736 705 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 PCSK1P29120 753 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 OR1D2P34982 312 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 ASPAP45381 313 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 CLCN4P51793 760 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 RAB33AQ14088 237 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 CCDC85BQ15834 202 aaPredicted RBP15.37■□□□□ 0.05
VRK3-213ENST00000597215 EXOC3L4Q17RC7 722 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 RSPO2Q6UXX9 243 aaPredicted RBP15.37■□□□□ 0.05
VRK3-213ENST00000597215 GBP6Q6ZN66 633 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 EFHBQ8N7U6 833 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 KBTBD7Q8WVZ9 684 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 BCO2Q9BYV7 579 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 INTS2Q9H0H0 1204 aaKnown RBP15.37■□□□□ 0.05
VRK3-213ENST00000597215 VPS16Q9H269 839 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 SNX25Q9H3E2 840 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 IGFLR1Q9H665 355 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 CYP3A43Q9HB55 503 aa15.37■□□□□ 0.05
VRK3-213ENST00000597215 DDX43Q9NXZ2 648 aaKnown RBP15.37■□□□□ 0.05
VRK3-213ENST00000597215 PLXNA3P51805 1871 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 ADAM12O43184 909 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 SRGAP2BP0DMP2 458 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 ATP1A3P13637 1013 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 CPB1P15086 417 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 GTF2F1P35269 517 aaKnown RBP eCLIP15.36■□□□□ 0.05
VRK3-213ENST00000597215 COPB1P53618 953 aaKnown RBP15.36■□□□□ 0.05
VRK3-213ENST00000597215 ARPP19P56211 112 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 TSPY1Q01534 308 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 ROR1Q01973 937 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 ELMSAN1Q6PJG2 1045 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 OSTM1Q86WC4 334 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 EHBP1Q8NDI1 1231 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 OR6B3Q8NGW1 331 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 OR10T2Q8NGX3 314 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 MAFAQ8NHW3 353 aaPredicted RBP15.36■□□□□ 0.05
VRK3-213ENST00000597215 LMO3Q8TAP4 145 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 RTP3Q9BQQ7 232 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 ACBD6Q9BR61 282 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 MRPL45Q9BRJ2 306 aaKnown RBP15.36■□□□□ 0.05
VRK3-213ENST00000597215 CRACR2AQ9BSW2 395 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 ANP32EQ9BTT0 268 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 HCFC2Q9Y5Z7 792 aa15.36■□□□□ 0.05
VRK3-213ENST00000597215 LRRC10BA6NIK2 292 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 LGALS16A8MUM7 142 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 TBXAS1P24557 533 aaPredicted RBP15.35■□□□□ 0.05
VRK3-213ENST00000597215 GNL1P36915 607 aaPredicted RBP15.35■□□□□ 0.05
VRK3-213ENST00000597215 RAP1GAPP47736 663 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 CDH8P55286 799 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 LRMPQ12912 555 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 SKIV2LQ15477 1246 aaKnown RBP15.35■□□□□ 0.05
VRK3-213ENST00000597215 FKBP15Q5T1M5 1219 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 TPGS2Q68CL5 300 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 LLGL2Q6P1M3 1020 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 PALB2Q86YC2 1186 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 DCP1BQ8IZD4 617 aaKnown RBP15.35■□□□□ 0.05
VRK3-213ENST00000597215 TTC39CQ8N584 583 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 SLC22A17Q8WUG5 538 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 PPM1EQ8WY54 764 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 CASP10Q92851 521 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 TATDN2Q93075 761 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 PABPC5Q96DU9 382 aaKnown RBP15.35■□□□□ 0.05
VRK3-213ENST00000597215 ZCWPW1Q9H0M4 648 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 SDCBP2Q9H190 292 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 FAM124BQ9H5Z6 455 aaPredicted RBP15.35■□□□□ 0.05
VRK3-213ENST00000597215 DPP7Q9UHL4 492 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 CDH9Q9ULB4 789 aa15.35■□□□□ 0.05
VRK3-213ENST00000597215 REV3LO60673 3130 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 EYSQ5T1H1 3165 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 WDR27A2RRH5 827 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 A8MXQ7 604 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 TGM5O43548 720 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 WEE2P0C1S8 567 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 OR4Q2P0C623 313 aa15.34■□□□□ 0.05
VRK3-213ENST00000597215 EPCAMP16422 314 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms