RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 DCAF17Q5H9S7 520 aaPredicted RBP11.91□□□□□ -0.5
LIG1-211ENST00000596457 ATAT1Q5SQI0 421 aa11.91□□□□□ -0.5
LIG1-211ENST00000596457 RNF19BQ6ZMZ0 732 aa11.91□□□□□ -0.5
LIG1-211ENST00000596457 INTS8Q75QN2 995 aaKnown RBP11.91□□□□□ -0.5
LIG1-211ENST00000596457 CXorf38Q8TB03 319 aa11.91□□□□□ -0.5
LIG1-211ENST00000596457 SLC7A14Q8TBB6 771 aa11.91□□□□□ -0.5
LIG1-211ENST00000596457 SMG7Q92540 1137 aaKnown RBP11.91□□□□□ -0.5
LIG1-211ENST00000596457 RIPOR3Q96MK2 946 aa11.91□□□□□ -0.5
LIG1-211ENST00000596457 ADAM7Q9H2U9 754 aa11.91□□□□□ -0.5
LIG1-211ENST00000596457 PLEKHA4Q9H4M7 779 aa11.91□□□□□ -0.5
LIG1-211ENST00000596457 CYP4F11Q9HBI6 524 aa11.91□□□□□ -0.5
LIG1-211ENST00000596457 FBXW11Q9UKB1 542 aa11.91□□□□□ -0.5
LIG1-211ENST00000596457 L1RE1Q9UN81 338 aa11.91□□□□□ -0.5
LIG1-211ENST00000596457 REV3LO60673 3130 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 OR6C75A6NL08 312 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 TBC1D4O60343 1298 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 GPR37L1O60883 481 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 ZMYND10O75800 440 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 OAZ2O95190 189 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 ACAT1P24752 427 aaKnown RBP11.9□□□□□ -0.5
LIG1-211ENST00000596457 PIK3CAP42336 1068 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 MTHFRP42898 656 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 NHLH1Q02575 133 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 ADCY1Q08828 1119 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 NCOA4Q13772 614 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 CBX2Q14781 532 aaPredicted RBP11.9□□□□□ -0.5
LIG1-211ENST00000596457 TPD52L1Q16890 204 aaPredicted RBP11.9□□□□□ -0.5
LIG1-211ENST00000596457 WDR72Q3MJ13 1102 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 SLC39A12Q504Y0 691 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 C1orf220Q5T0J3 134 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 SLC8B1Q6J4K2 584 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 ADGRF2Q8IZF7 708 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 PDCL2Q8N4E4 241 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 ZNF461Q8TAF7 563 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 HDAC7Q8WUI4 952 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 TMEM174Q8WUU8 243 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 SYAP1Q96A49 352 aaPredicted RBP11.9□□□□□ -0.5
LIG1-211ENST00000596457 RPGRIP1Q96KN7 1286 aa11.9□□□□□ -0.5
LIG1-211ENST00000596457 DUSP9Q99956 384 aaKnown RBP11.9□□□□□ -0.5
LIG1-211ENST00000596457 SRRTQ9BXP5 876 aaKnown RBP11.9□□□□□ -0.5
LIG1-211ENST00000596457 IKBKBO14920 756 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 SLC16A3O15427 465 aaKnown RBP11.89□□□□□ -0.51
LIG1-211ENST00000596457 HCRTO43612 131 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 ABLIM3O94929 683 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 SEC24AO95486 1093 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 VNN1O95497 513 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 MBD3O95983 291 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 HLA-DRAP01903 254 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 LRG1P02750 347 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 CYP11A1P05108 521 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 PDGFRBP09619 1106 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 NLRP12P59046 1061 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 MYL7Q01449 175 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 ZP2Q05996 745 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 PPP3CAQ08209 521 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 SOWAHAQ2M3V2 549 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 ZNF699Q32M78 642 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 ZNF667Q5HYK9 610 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 TTI2Q6NXR4 508 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 SCARA5Q6ZMJ2 495 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 CCDC149Q6ZUS6 474 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 SV2AQ7L0J3 742 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 FILIP1Q7Z7B0 1213 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 GPR149Q86SP6 731 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 OSTM1Q86WC4 334 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 TOP6BLQ8N6T0 577 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 OR6B3Q8NGW1 331 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 OR10T2Q8NGX3 314 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 PI4K2AQ9BTU6 479 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 MKNK1Q9BUB5 465 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 OXCT2Q9BYC2 517 aaPredicted RBP11.89□□□□□ -0.51
LIG1-211ENST00000596457 PRKD2Q9BZL6 878 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 SNX25Q9H3E2 840 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 POMKQ9H5K3 350 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 GDAP2Q9NXN4 497 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 DDX43Q9NXZ2 648 aaKnown RBP11.89□□□□□ -0.51
LIG1-211ENST00000596457 SLC27A5Q9Y2P5 690 aa11.89□□□□□ -0.51
LIG1-211ENST00000596457 STX10O60499 249 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 ATF2P15336 505 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 ATICP31939 592 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 RAP1GAPP47736 663 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 CDH8P55286 799 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 CLDN10P78369 228 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 TSPY1Q01534 308 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 DUSP4Q13115 394 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 GPR17Q13304 367 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 SGSM1Q2NKQ1 1148 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 ZACNQ401N2 412 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 TPGS2Q68CL5 300 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 SPOPLQ6IQ16 392 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 GRASPQ7Z6J2 395 aaPredicted RBP11.88□□□□□ -0.51
LIG1-211ENST00000596457 ZC3H3Q8IXZ2 948 aaKnown RBP11.88□□□□□ -0.51
LIG1-211ENST00000596457 DCP1BQ8IZD4 617 aaKnown RBP11.88□□□□□ -0.51
LIG1-211ENST00000596457 TMEM86AQ8N2M4 240 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 MLKLQ8NB16 471 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 SUSD6Q92537 303 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 CEP63Q96MT8 703 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 RTP3Q9BQQ7 232 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 MRPL45Q9BRJ2 306 aaKnown RBP11.88□□□□□ -0.51
LIG1-211ENST00000596457 PHF7Q9BWX1 381 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms