RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 SMC3Q9UQE7 1217 aa17.25■□□□□ 0.35
LINC02560-201ENST00000596379 ANO9A1A5B4 782 aa17.24■□□□□ 0.35
LINC02560-201ENST00000596379 SLC38A8A6NNN8 435 aa17.24■□□□□ 0.35
LINC02560-201ENST00000596379 TISP43B9A030 160 aa17.24■□□□□ 0.35
LINC02560-201ENST00000596379 DPYSL4O14531 572 aa17.24■□□□□ 0.35
LINC02560-201ENST00000596379 TBCAO75347 108 aaKnown RBP17.24■□□□□ 0.35
LINC02560-201ENST00000596379 LONP1P36776 959 aaKnown RBP17.24■□□□□ 0.35
LINC02560-201ENST00000596379 GAS6Q14393 721 aa17.24■□□□□ 0.35
LINC02560-201ENST00000596379 SLC39A12Q504Y0 691 aa17.24■□□□□ 0.35
LINC02560-201ENST00000596379 GPR158Q5T848 1215 aa17.24■□□□□ 0.35
LINC02560-201ENST00000596379 ADALQ6DHV7 355 aa17.24■□□□□ 0.35
LINC02560-201ENST00000596379 ITIH5Q86UX2 942 aa17.24■□□□□ 0.35
LINC02560-201ENST00000596379 TTC8Q8TAM2 541 aa17.24■□□□□ 0.35
LINC02560-201ENST00000596379 FAM200AQ8TCP9 573 aa17.24■□□□□ 0.35
LINC02560-201ENST00000596379 ZFYVE19Q96K21 471 aa17.24■□□□□ 0.35
LINC02560-201ENST00000596379 LPIN3Q9BQK8 851 aa17.24■□□□□ 0.35
LINC02560-201ENST00000596379 C8orf33Q9H7E9 229 aaPredicted RBP17.24■□□□□ 0.35
LINC02560-201ENST00000596379 RBM12Q9NTZ6 932 aaKnown RBP17.24■□□□□ 0.35
LINC02560-201ENST00000596379 HSFX1Q9UBD0 423 aa17.24■□□□□ 0.35
LINC02560-201ENST00000596379 DERAQ9Y315 318 aa17.24■□□□□ 0.35
LINC02560-201ENST00000596379 TCHHQ07283 1943 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 NUP210Q8TEM1 1887 aaPredicted RBP17.23■□□□□ 0.35
LINC02560-201ENST00000596379 FGF19O95750 216 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 CYP11A1P05108 521 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 TGM1P22735 817 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 DDIT3P35638 169 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 TUFMP49411 452 aaKnown RBP17.23■□□□□ 0.35
LINC02560-201ENST00000596379 ATXN1P54253 815 aaKnown RBP17.23■□□□□ 0.35
LINC02560-201ENST00000596379 SF3A1Q15459 793 aaKnown RBP17.23■□□□□ 0.35
LINC02560-201ENST00000596379 LPAL2Q16609 132 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 ARHGAP15Q53QZ3 475 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 SLFN12LQ6IEE8 588 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 SPEM1Q8N4L4 309 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 CELF5Q8N6W0 485 aaKnown RBP17.23■□□□□ 0.35
LINC02560-201ENST00000596379 LARP4BQ92615 738 aaKnown RBP17.23■□□□□ 0.35
LINC02560-201ENST00000596379 MSANTD3Q96H12 275 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 SEPT5Q99719 369 aaPredicted RBP17.23■□□□□ 0.35
LINC02560-201ENST00000596379 ZCWPW1Q9H0M4 648 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 ASB7Q9H672 318 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 GTSE1Q9NYZ3 720 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 GMEB2Q9UKD1 530 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 AGO2Q9UKV8 859 aaKnown RBP17.23■□□□□ 0.35
LINC02560-201ENST00000596379 USP18Q9UMW8 372 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 TSC2P49815 1807 aa17.23■□□□□ 0.35
LINC02560-201ENST00000596379 MYBPHLA2RUH7 354 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 SPECC1L-ADORA2AF8WAN1 911 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 CYB561D2O14569 222 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 BMP15O95972 392 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 SDHBP21912 280 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 ABCD1P33897 745 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 LRRC32Q14392 662 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 MGAT5BQ3V5L5 792 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 ARHGAP29Q52LW3 1261 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 WDR44Q5JSH3 913 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 C1orf228Q6PIY5 440 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 TXNDC11Q6PKC3 985 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 PRR23BQ6ZRT6 265 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 LRRTM3Q86VH5 581 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 METTL23Q86XA0 190 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 THEM5Q8N1Q8 247 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 PYM1Q9BRP8 204 aaKnown RBP17.22■□□□□ 0.35
LINC02560-201ENST00000596379 IKZF4Q9H2S9 585 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 TASP1Q9H6P5 420 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 PARD6AQ9NPB6 346 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 DPP3Q9NY33 737 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 OBP2AQ9NY56 170 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 DSEQ9UL01 958 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 RAB23Q9ULC3 237 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 C2CD2Q9Y426 696 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 STYXL1Q9Y6J8 313 aa17.22■□□□□ 0.35
LINC02560-201ENST00000596379 KIF26AQ9ULI4 1882 aaPredicted RBP17.22■□□□□ 0.35
LINC02560-201ENST00000596379 PRR5-ARHGAP8B1AHC4 643 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 ATF6P18850 670 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 CTHP32929 405 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 TAF6P49848 677 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 ARHGAP8P85298 464 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 CYP4F8P98187 520 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 LMNB2Q03252 620 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 DMWDQ09019 674 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 SPEM2Q0P670 501 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 VEPH1Q14D04 833 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 WSCD1Q658N2 575 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 ZNF720Q7Z2F6 126 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 BRAPQ7Z569 592 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 RALGPS2Q86X27 583 aaPredicted RBP17.21■□□□□ 0.35
LINC02560-201ENST00000596379 KRI1Q8N9T8 703 aaKnown RBP17.21■□□□□ 0.35
LINC02560-201ENST00000596379 GIPC2Q8TF65 315 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 EPSTI1Q96J88 318 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 CCSER1Q9C0I3 900 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 ST6GALNAC4Q9H4F1 302 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 IL21Q9HBE4 155 aa17.21■□□□□ 0.35
LINC02560-201ENST00000596379 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.21■□□□□ 0.35
LINC02560-201ENST00000596379 CHURC1-FNTBB4DL54 471 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 HRO43593 1189 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 PRAMEF12O95522 483 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 WEE1P30291 646 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 CDC25CP30307 473 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 FNTBP49356 437 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 MCM2P49736 904 aa17.2■□□□□ 0.34
LINC02560-201ENST00000596379 TNK2Q07912 1038 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms