RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 ARSHQ5FYA8 562 aa20.21■□□□□ 0.83
PDE4C-208ENST00000595343 GPR158Q5T848 1215 aa20.21■□□□□ 0.83
PDE4C-208ENST00000595343 SPATA1Q5VX52 437 aa20.21■□□□□ 0.83
PDE4C-208ENST00000595343 HEATR6Q6AI08 1181 aaKnown RBP20.21■□□□□ 0.83
PDE4C-208ENST00000595343 ARMCX5Q6P1M9 558 aa20.21■□□□□ 0.83
PDE4C-208ENST00000595343 PRR23CQ6ZRP0 262 aa20.21■□□□□ 0.83
PDE4C-208ENST00000595343 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.21■□□□□ 0.83
PDE4C-208ENST00000595343 FAM200AQ8TCP9 573 aa20.21■□□□□ 0.83
PDE4C-208ENST00000595343 CDK5RAP3Q96JB5 506 aa20.21■□□□□ 0.83
PDE4C-208ENST00000595343 SENP8Q96LD8 212 aa20.21■□□□□ 0.83
PDE4C-208ENST00000595343 TSPAN18Q96SJ8 248 aa20.21■□□□□ 0.83
PDE4C-208ENST00000595343 RPF1Q9H9Y2 349 aaKnown RBP20.21■□□□□ 0.83
PDE4C-208ENST00000595343 OBP2AQ9NY56 170 aa20.21■□□□□ 0.83
PDE4C-208ENST00000595343 CHD8Q9HCK8 2581 aa20.21■□□□□ 0.83
PDE4C-208ENST00000595343 HNRNPDLO14979 420 aaKnown RBP20.2■□□□□ 0.82
PDE4C-208ENST00000595343 OGTO15294 1046 aa20.2■□□□□ 0.82
PDE4C-208ENST00000595343 ODC1P11926 461 aa20.2■□□□□ 0.82
PDE4C-208ENST00000595343 PON2Q15165 354 aa20.2■□□□□ 0.82
PDE4C-208ENST00000595343 TMEM119Q4V9L6 283 aa20.2■□□□□ 0.82
PDE4C-208ENST00000595343 RILPL1Q5EBL4 403 aa20.2■□□□□ 0.82
PDE4C-208ENST00000595343 ITIH5Q86UX2 942 aa20.2■□□□□ 0.82
PDE4C-208ENST00000595343 HSFX1Q9UBD0 423 aa20.2■□□□□ 0.82
PDE4C-208ENST00000595343 TBX20Q9UMR3 447 aa20.2■□□□□ 0.82
PDE4C-208ENST00000595343 VWA3AA6NCI4 1184 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 PRAMEF12O95522 483 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 PIGRP01833 764 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 WEE1P30291 646 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 HOXC13P31276 330 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 CCINQ13939 588 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 PPM1JQ5JR12 505 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 MCTP1Q6DN14 999 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 JADE1Q6IE81 842 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 SYNPOQ8N3V7 929 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 OR10T2Q8NGX3 314 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 BPIFB1Q8TDL5 484 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 FAM212AQ96EL1 285 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 TASP1Q9H6P5 420 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 ODF2LQ9ULJ1 636 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 NUP210Q8TEM1 1887 aaPredicted RBP20.19■□□□□ 0.82
PDE4C-208ENST00000595343 RALGAPA1Q6GYQ0 2036 aa20.19■□□□□ 0.82
PDE4C-208ENST00000595343 A0A0B4J269 797 aa20.18■□□□□ 0.82
PDE4C-208ENST00000595343 GDF9O60383 454 aa20.18■□□□□ 0.82
PDE4C-208ENST00000595343 PAX3P23760 479 aa20.18■□□□□ 0.82
PDE4C-208ENST00000595343 HOXA6P31267 233 aa20.18■□□□□ 0.82
PDE4C-208ENST00000595343 CYP4F8P98187 520 aa20.18■□□□□ 0.82
PDE4C-208ENST00000595343 PLCB2Q00722 1185 aa20.18■□□□□ 0.82
PDE4C-208ENST00000595343 TNK2Q07912 1038 aa20.18■□□□□ 0.82
PDE4C-208ENST00000595343 SLC39A12Q504Y0 691 aa20.18■□□□□ 0.82
PDE4C-208ENST00000595343 C9orf57Q5W0N0 161 aa20.18■□□□□ 0.82
PDE4C-208ENST00000595343 CEP68Q76N32 757 aa20.18■□□□□ 0.82
PDE4C-208ENST00000595343 CD302Q8IX05 232 aa20.18■□□□□ 0.82
PDE4C-208ENST00000595343 FAM160A2Q8N612 972 aaPredicted RBP20.18■□□□□ 0.82
PDE4C-208ENST00000595343 KIF2CQ99661 725 aa20.18■□□□□ 0.82
PDE4C-208ENST00000595343 SEPT5Q99719 369 aaPredicted RBP20.18■□□□□ 0.82
PDE4C-208ENST00000595343 LPIN3Q9BQK8 851 aa20.18■□□□□ 0.82
PDE4C-208ENST00000595343 REEP2Q9BRK0 252 aa20.18■□□□□ 0.82
PDE4C-208ENST00000595343 MSTO1Q9BUK6 570 aa20.18■□□□□ 0.82
PDE4C-208ENST00000595343 CPSF3Q9UKF6 684 aaKnown RBP20.18■□□□□ 0.82
PDE4C-208ENST00000595343 MAP1BP46821 2468 aaKnown RBP20.18■□□□□ 0.82
PDE4C-208ENST00000595343 K7ENM7 598 aa20.17■□□□□ 0.82
PDE4C-208ENST00000595343 PIRO00625 290 aa20.17■□□□□ 0.82
PDE4C-208ENST00000595343 CYP11A1P05108 521 aa20.17■□□□□ 0.82
PDE4C-208ENST00000595343 NFICP08651 508 aa20.17■□□□□ 0.82
PDE4C-208ENST00000595343 SCP2P22307 547 aa20.17■□□□□ 0.82
PDE4C-208ENST00000595343 TUFMP49411 452 aaKnown RBP20.17■□□□□ 0.82
PDE4C-208ENST00000595343 CDR1P51861 262 aa20.17■□□□□ 0.82
PDE4C-208ENST00000595343 VEPH1Q14D04 833 aa20.17■□□□□ 0.82
PDE4C-208ENST00000595343 WDR5BQ86VZ2 330 aa20.17■□□□□ 0.82
PDE4C-208ENST00000595343 MYCT1Q8N699 235 aa20.17■□□□□ 0.82
PDE4C-208ENST00000595343 ZCWPW1Q9H0M4 648 aa20.17■□□□□ 0.82
PDE4C-208ENST00000595343 IL21Q9HBE4 155 aa20.17■□□□□ 0.82
PDE4C-208ENST00000595343 SDK1Q7Z5N4 2213 aa20.17■□□□□ 0.82
PDE4C-208ENST00000595343 ANO9A1A5B4 782 aa20.16■□□□□ 0.82
PDE4C-208ENST00000595343 FOXD2O60548 495 aaPredicted RBP20.16■□□□□ 0.82
PDE4C-208ENST00000595343 ATF6P18850 670 aa20.16■□□□□ 0.82
PDE4C-208ENST00000595343 CDC25CP30307 473 aa20.16■□□□□ 0.82
PDE4C-208ENST00000595343 TMEM132DQ14C87 1099 aa20.16■□□□□ 0.82
PDE4C-208ENST00000595343 ITPRIPL2Q3MIP1 535 aa20.16■□□□□ 0.82
PDE4C-208ENST00000595343 MGAT5BQ3V5L5 792 aa20.16■□□□□ 0.82
PDE4C-208ENST00000595343 ARL6IP4Q66PJ3 421 aaKnown RBP20.16■□□□□ 0.82
PDE4C-208ENST00000595343 SLC39A4Q6P5W5 647 aa20.16■□□□□ 0.82
PDE4C-208ENST00000595343 GPBP1Q86WP2 473 aa20.16■□□□□ 0.82
PDE4C-208ENST00000595343 SLC46A2Q9BY10 475 aa20.16■□□□□ 0.82
PDE4C-208ENST00000595343 SMG9Q9H0W8 520 aaKnown RBP20.16■□□□□ 0.82
PDE4C-208ENST00000595343 THG1LQ9NWX6 298 aaKnown RBP20.16■□□□□ 0.82
PDE4C-208ENST00000595343 CNOT1A5YKK6 2376 aaKnown RBP20.16■□□□□ 0.82
PDE4C-208ENST00000595343 TSC2P49815 1807 aa20.16■□□□□ 0.82
PDE4C-208ENST00000595343 ANK1P16157 1881 aa20.16■□□□□ 0.82
PDE4C-208ENST00000595343 EXTL3O43909 919 aa20.15■□□□□ 0.82
PDE4C-208ENST00000595343 FAM13AO94988 1023 aa20.15■□□□□ 0.82
PDE4C-208ENST00000595343 MCM2P49736 904 aa20.15■□□□□ 0.82
PDE4C-208ENST00000595343 ZNF131P52739 623 aa20.15■□□□□ 0.82
PDE4C-208ENST00000595343 DHX8Q14562 1220 aaKnown RBP20.15■□□□□ 0.82
PDE4C-208ENST00000595343 LRRC15Q8TF66 581 aa20.15■□□□□ 0.82
PDE4C-208ENST00000595343 GCNAQ96QF7 691 aa20.15■□□□□ 0.82
PDE4C-208ENST00000595343 PARVGQ9HBI0 331 aa20.15■□□□□ 0.82
PDE4C-208ENST00000595343 DSEQ9UL01 958 aa20.15■□□□□ 0.82
PDE4C-208ENST00000595343 DERAQ9Y315 318 aa20.15■□□□□ 0.82
PDE4C-208ENST00000595343 KIF3AQ9Y496 699 aa20.15■□□□□ 0.82
PDE4C-208ENST00000595343 KIF26AQ9ULI4 1882 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms