RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 C1QBPQ07021 282 aaKnown RBP17.43■□□□□ 0.38
LIG1-206ENST00000594067 CCDC15Q0P6D6 951 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 ANKRD20A2Q5SQ80 823 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 ANKRD20A1Q5TYW2 823 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 ANKRD20A3Q5VUR7 823 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 PPP1R21Q6ZMI0 780 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 ANKRD35Q8N283 1001 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 NSUN6Q8TEA1 469 aaKnown RBP17.43■□□□□ 0.38
LIG1-206ENST00000594067 MRRFQ96E11 262 aaKnown RBP17.43■□□□□ 0.38
LIG1-206ENST00000594067 SLITRK1Q96PX8 696 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 EDN1P05305 212 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 GCAP28676 217 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 CETN2P41208 172 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 ARSEP51690 589 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 ATP11AP98196 1134 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 CFAP57Q96MR6 1250 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 PITPNM3Q9BZ71 974 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 KIF9Q9HAQ2 790 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 ETNK1Q9HBU6 452 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 SLC24A3Q9HC58 644 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 IP6K2Q9UHH9 426 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 STYXL1Q9Y6J8 313 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 IVNS1ABPQ9Y6Y0 642 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 FAM47DPA6NHR8 397 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 K7ERI5 159 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 PECAM1P16284 738 aaPredicted RBP17.42■□□□□ 0.38
LIG1-206ENST00000594067 GLRA2P23416 452 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 GPS1Q13098 491 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 XKR3Q5GH77 459 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 TXNRD3NBQ6F5E7 133 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 DEPTORQ8TB45 409 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 ZNF606Q8WXB4 792 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 GRAMD1AQ96CP6 724 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 SPDL1Q96EA4 605 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 ADAM33Q9BZ11 813 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 FBXO40Q9UH90 709 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 ACTL7BQ9Y614 415 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 F8VP50 259 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 CLGNO14967 610 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 ABHD2P08910 425 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 ATP4AP20648 1035 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 IL9RQ01113 521 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 ZNF252P-AS1Q0IIN9 211 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 RCOR2Q8IZ40 523 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 ZNF526Q8TF50 670 aaPredicted RBP17.42■□□□□ 0.38
LIG1-206ENST00000594067 SPOCK2Q92563 424 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 MCEEQ96PE7 176 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 CGRRF1Q99675 332 aa17.42■□□□□ 0.38
LIG1-206ENST00000594067 SRCAPQ6ZRS2 3230 aa17.41■□□□□ 0.38
LIG1-206ENST00000594067 SMNDC1O75940 238 aaKnown RBP eCLIP17.41■□□□□ 0.381e-10■■■□□ 18.1
LIG1-206ENST00000594067 LMNB2Q03252 620 aa17.41■□□□□ 0.38
LIG1-206ENST00000594067 NCOA4Q13772 614 aa17.41■□□□□ 0.38
LIG1-206ENST00000594067 TRABD2AQ86V40 505 aa17.41■□□□□ 0.38
LIG1-206ENST00000594067 RBM41Q96IZ5 413 aaKnown RBP17.41■□□□□ 0.38
LIG1-206ENST00000594067 VPS37BQ9H9H4 285 aa17.41■□□□□ 0.38
LIG1-206ENST00000594067 TMEM191CA6NGB0 347 aa17.41■□□□□ 0.38
LIG1-206ENST00000594067 TMEM191BP0C7N4 346 aa17.41■□□□□ 0.38
LIG1-206ENST00000594067 SUPT20HL2P0C7V6 817 aa17.41■□□□□ 0.38
LIG1-206ENST00000594067 MMP8P22894 467 aa17.41■□□□□ 0.38
LIG1-206ENST00000594067 SP2Q02086 613 aa17.41■□□□□ 0.38
LIG1-206ENST00000594067 OGDHQ02218 1023 aa17.41■□□□□ 0.38
LIG1-206ENST00000594067 DNAJC3Q13217 504 aa17.41■□□□□ 0.38
LIG1-206ENST00000594067 PKN2Q16513 984 aaKnown RBP17.41■□□□□ 0.38
LIG1-206ENST00000594067 SUPT20HL1Q3ZLR7 823 aa17.41■□□□□ 0.38
LIG1-206ENST00000594067 ZNF394Q53GI3 561 aa17.41■□□□□ 0.38
LIG1-206ENST00000594067 EAPPQ56P03 285 aaPredicted RBP17.41■□□□□ 0.38
LIG1-206ENST00000594067 ALLCQ8N6M5 410 aa17.41■□□□□ 0.38
LIG1-206ENST00000594067 WFS1O76024 890 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 TJP3O95049 919 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 TBXAS1P24557 533 aaPredicted RBP17.4■□□□□ 0.38
LIG1-206ENST00000594067 CCNHP51946 323 aaPredicted RBP17.4■□□□□ 0.38
LIG1-206ENST00000594067 SPOCD1Q6ZMY3 1216 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 C4orf33Q8N1A6 199 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 RIBC1Q8N443 379 aaPredicted RBP17.4■□□□□ 0.38
LIG1-206ENST00000594067 MYLK2Q9H1R3 596 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 TRABDQ9H4I3 376 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 CNTN6Q9UQ52 1028 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 DOCK5Q9H7D0 1870 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 NFASCO94856 1347 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 CNTNAP2Q9UHC6 1331 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 RGPD3A6NKT7 1758 aaPredicted RBP17.4■□□□□ 0.38
LIG1-206ENST00000594067 RGPD4Q7Z3J3 1758 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 ASMTLO95671 621 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 CST3P01034 146 aaPredicted RBP17.4■□□□□ 0.38
LIG1-206ENST00000594067 KRT15P19012 456 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 BRD2P25440 801 aaKnown RBP17.4■□□□□ 0.38
LIG1-206ENST00000594067 GRIK3Q13003 919 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 SLFN12LQ6IEE8 588 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 DCUN1D2Q6PH85 259 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 REPS2Q8NFH8 660 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 FBF1Q8TES7 1133 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 FOXP3Q9BZS1 431 aa17.4■□□□□ 0.38
LIG1-206ENST00000594067 NKX1-2Q9UD57 310 aaPredicted RBP17.4■□□□□ 0.38
LIG1-206ENST00000594067 PPP1R12AO14974 1030 aaPredicted RBP17.39■□□□□ 0.37
LIG1-206ENST00000594067 BANF1O75531 89 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 IFNB1P01574 187 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 PLCB3Q01970 1234 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 DNAJC24Q6P3W2 148 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 ZBED8Q8IZ13 594 aa17.39■□□□□ 0.37
LIG1-206ENST00000594067 RAB3IPQ96QF0 476 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms