RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ATF7P17544 494 aaPredicted RBP14.4□□□□□ -0.1
VMP1-217ENST00000593168 GFPT1Q06210 699 aaPredicted RBP14.4□□□□□ -0.1
VMP1-217ENST00000593168 MYO1EQ12965 1108 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 GLRA4Q5JXX5 417 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 C10orf76Q5T2E6 689 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 ECHDC2Q86YB7 292 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 GPIHBP1Q8IV16 184 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 TXLNBQ8N3L3 684 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 GSTCDQ8NEC7 633 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 SEPT8Q92599 483 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 APBB2Q92870 758 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 PPP1R10Q96QC0 940 aaKnown RBP14.4□□□□□ -0.1
VMP1-217ENST00000593168 GAD1Q99259 594 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 ARID3AQ99856 593 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 AGPAT1Q99943 283 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 ZBED2Q9BTP6 218 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 LUC7LQ9NQ29 371 aaKnown RBP14.4□□□□□ -0.1
VMP1-217ENST00000593168 LMCD1Q9NZU5 365 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 TUBGCP4Q9UGJ1 667 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 ADAMTS1Q9UHI8 967 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 PCDHB4Q9Y5E5 795 aa14.4□□□□□ -0.1
VMP1-217ENST00000593168 A0A087X0T9 212 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.39□□□□□ -0.11
VMP1-217ENST00000593168 MEIS3P2A8K0S8 358 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 INPPL1O15357 1258 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 CLSTN1O94985 981 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 CXCL10P02778 98 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 TUBB4AP04350 444 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 FAM228BP0C875 321 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 KRT5P13647 590 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 CYP11B1P15538 503 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 TNFAIP3P21580 790 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 LRPAP1P30533 357 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 PNPLA4P41247 253 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 MAGEA1P43355 309 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 ASPAP45381 313 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 GUCY2FP51841 1108 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 CYP27A1Q02318 531 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 WDR72Q3MJ13 1102 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 C9orf57Q5W0N0 161 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 CNKSR3Q6P9H4 555 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 NYAP1Q6ZVC0 841 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 TTC39CQ8N584 583 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 DBF4BQ8NFT6 615 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 SLC30A5Q8TAD4 765 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 EPS8L1Q8TE68 723 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 LPPQ93052 612 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 C18orf25Q96B23 403 aaPredicted RBP14.39□□□□□ -0.11
VMP1-217ENST00000593168 ZFP42Q96MM3 310 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 RPS6KC1Q96S38 1066 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.39□□□□□ -0.11
VMP1-217ENST00000593168 BCO2Q9BYV7 579 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 UBE2ZQ9H832 354 aaPredicted RBP14.39□□□□□ -0.11
VMP1-217ENST00000593168 RSAD1Q9HA92 442 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 RRAGDQ9NQL2 400 aaPredicted RBP14.39□□□□□ -0.11
VMP1-217ENST00000593168 NXF1Q9UBU9 619 aaKnown RBP14.39□□□□□ -0.11
VMP1-217ENST00000593168 NENFQ9UMX5 172 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 PCDHA13Q9Y5I0 950 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 ATP8B3O60423 1300 aa14.39□□□□□ -0.11
VMP1-217ENST00000593168 LINC01553A4QN01 128 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 ARL5CA6NH57 179 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 KIF2AO00139 706 aaPredicted RBP14.38□□□□□ -0.11
VMP1-217ENST00000593168 DDX3XO00571 662 aaKnown RBP eCLIP14.38□□□□□ -0.113e-8■■■□□ 15.8
VMP1-217ENST00000593168 GJB5O95377 273 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 THP07101 528 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 MLH1P40692 756 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 VAV2P52735 878 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 ZNF132P52740 706 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 ERVK-21P61565 698 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 NAB2Q15742 525 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 TMEM270Q6UE05 265 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 KIAA1328Q86T90 577 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 SLC47A2Q86VL8 602 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 ZNF677Q86XU0 584 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 OLIG1Q8TAK6 271 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 LNX1Q8TBB1 728 aaPredicted RBP14.38□□□□□ -0.11
VMP1-217ENST00000593168 LINC01599Q8WXQ3 324 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 ZNF560Q96MR9 790 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 RAD9AQ99638 391 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 ELAC1Q9H777 363 aaKnown RBP14.38□□□□□ -0.11
VMP1-217ENST00000593168 CISHQ9NSE2 258 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 NAGPAQ9UK23 515 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 NOCTQ9UK39 431 aaKnown RBP14.38□□□□□ -0.11
VMP1-217ENST00000593168 POLIQ9UNA4 740 aa14.38□□□□□ -0.11
VMP1-217ENST00000593168 ENPP3O14638 875 aa14.37□□□□□ -0.11
VMP1-217ENST00000593168 PJA2O43164 708 aa14.37□□□□□ -0.11
VMP1-217ENST00000593168 WEE2P0C1S8 567 aa14.37□□□□□ -0.11
VMP1-217ENST00000593168 RPL9P32969 192 aaKnown RBP14.37□□□□□ -0.11
VMP1-217ENST00000593168 ARHGAP25P42331 645 aa14.37□□□□□ -0.11
VMP1-217ENST00000593168 PDE6CP51160 858 aa14.37□□□□□ -0.11
VMP1-217ENST00000593168 TNNC1P63316 161 aa14.37□□□□□ -0.11
VMP1-217ENST00000593168 CDR2Q01850 454 aa14.37□□□□□ -0.11
VMP1-217ENST00000593168 SOX4Q06945 474 aaPredicted RBP14.37□□□□□ -0.11
VMP1-217ENST00000593168 PTPN14Q15678 1187 aa14.37□□□□□ -0.11
VMP1-217ENST00000593168 ARHGAP29Q52LW3 1261 aa14.37□□□□□ -0.11
VMP1-217ENST00000593168 FAM117BQ6P1L5 589 aa14.37□□□□□ -0.11
VMP1-217ENST00000593168 ALKBH5Q6P6C2 394 aaKnown RBP14.37□□□□□ -0.11
VMP1-217ENST00000593168 NOP9Q86U38 636 aaKnown RBP14.37□□□□□ -0.11
VMP1-217ENST00000593168 TMEM130Q8N3G9 435 aa14.37□□□□□ -0.11
VMP1-217ENST00000593168 RBBP8NLQ8NC74 664 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms