RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-218ENST00000592991 ZMYND8Q9ULU4 1186 aaPredicted RBP27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 BARX2Q9UMQ3 279 aaPredicted RBP27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 NENFQ9UMX5 172 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 PCDHA13Q9Y5I0 950 aa27.3■■□□□ 1.96
LDLRAD4-218ENST00000592991 THAP12O43422 761 aa27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 IPO7O95373 1038 aaKnown RBP27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 ABL1P00519 1130 aa27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 OR1G1P47890 313 aa27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 EPHB4P54760 987 aa27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 WDR5P61964 334 aaKnown RBP27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 CDR2Q01850 454 aa27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 SLC4A11Q8NBS3 891 aa27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 TFAP2BQ92481 460 aa27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 DDX27Q96GQ7 796 aaKnown RBP27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 SENP8Q96LD8 212 aa27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 PACSIN1Q9BY11 444 aa27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 NRDE2Q9H7Z3 1164 aa27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 RRAGDQ9NQL2 400 aaPredicted RBP27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 KANSL3Q9P2N6 904 aa27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 TRIM10Q9UDY6 481 aa27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 NAGPAQ9UK23 515 aa27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 PRG3Q9Y2Y8 225 aaPredicted RBP27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 TIMM13Q9Y5L4 95 aaPredicted RBP27.29■■□□□ 1.96
LDLRAD4-218ENST00000592991 BPIFB4P59827 614 aa27.28■■□□□ 1.96
LDLRAD4-218ENST00000592991 TIGD5Q53EQ6 642 aa27.28■■□□□ 1.96
LDLRAD4-218ENST00000592991 CCDC122Q5T0U0 273 aa27.28■■□□□ 1.96
LDLRAD4-218ENST00000592991 DSTYKQ6XUX3 929 aa27.28■■□□□ 1.96
LDLRAD4-218ENST00000592991 KIAA1328Q86T90 577 aa27.28■■□□□ 1.96
LDLRAD4-218ENST00000592991 OSTM1Q86WC4 334 aa27.28■■□□□ 1.96
LDLRAD4-218ENST00000592991 PDCL2Q8N4E4 241 aa27.28■■□□□ 1.96
LDLRAD4-218ENST00000592991 APPL2Q8NEU8 664 aa27.28■■□□□ 1.96
LDLRAD4-218ENST00000592991 OR6B3Q8NGW1 331 aa27.28■■□□□ 1.96
LDLRAD4-218ENST00000592991 UROC1Q96N76 676 aa27.28■■□□□ 1.96
LDLRAD4-218ENST00000592991 FAM193BQ96PV7 902 aaPredicted RBP27.28■■□□□ 1.96
LDLRAD4-218ENST00000592991 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.28■■□□□ 1.96
LDLRAD4-218ENST00000592991 ZSCAN12O43309 604 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 HOXA2O43364 376 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 HUS1O60921 280 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 CD19P15391 556 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 MAGEA1P43355 309 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 KRT83P78385 493 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 WSCD1Q658N2 575 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 ALKBH5Q6P6C2 394 aaKnown RBP27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 LIMS2Q7Z4I7 341 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 PASD1Q8IV76 773 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 ADGRF2Q8IZF7 708 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 LZTFL1Q9NQ48 299 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 KCND1Q9NSA2 647 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 TSC2P49815 1807 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 PFKMP08237 780 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 ANXA13P27216 316 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 FPGSQ05932 587 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 TMEM176AQ96HP8 235 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 LPIN3Q9BQK8 851 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 LACRTQ9GZZ8 138 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 DPEP3Q9H4B8 488 aa27.27■■□□□ 1.96
LDLRAD4-218ENST00000592991 AMHP03971 560 aa27.26■■□□□ 1.95
LDLRAD4-218ENST00000592991 PDGFRBP09619 1106 aa27.26■■□□□ 1.95
LDLRAD4-218ENST00000592991 LMO2P25791 158 aa27.26■■□□□ 1.95
LDLRAD4-218ENST00000592991 PBX3P40426 434 aa27.26■■□□□ 1.95
LDLRAD4-218ENST00000592991 ARHGAP25P42331 645 aa27.26■■□□□ 1.95
LDLRAD4-218ENST00000592991 AARSP49588 968 aaKnown RBP eCLIP27.26■■□□□ 1.95
LDLRAD4-218ENST00000592991 PPIGQ13427 754 aaKnown RBP eCLIP27.26■■□□□ 1.95
LDLRAD4-218ENST00000592991 ZNF365Q70YC5 407 aa27.26■■□□□ 1.95
LDLRAD4-218ENST00000592991 TOP6BLQ8N6T0 577 aa27.26■■□□□ 1.95
LDLRAD4-218ENST00000592991 ZNF606Q8WXB4 792 aa27.26■■□□□ 1.95
LDLRAD4-218ENST00000592991 TACC1O75410 805 aa27.25■■□□□ 1.95
LDLRAD4-218ENST00000592991 DGKIO75912 1065 aa27.25■■□□□ 1.95
LDLRAD4-218ENST00000592991 VAV2P52735 878 aa27.25■■□□□ 1.95
LDLRAD4-218ENST00000592991 DCLRE1AQ6PJP8 1040 aa27.25■■□□□ 1.95
LDLRAD4-218ENST00000592991 DPH6Q7L8W6 267 aa27.25■■□□□ 1.95
LDLRAD4-218ENST00000592991 ACOT1Q86TX2 421 aa27.25■■□□□ 1.95
LDLRAD4-218ENST00000592991 TOP1MTQ969P6 601 aa27.25■■□□□ 1.95
LDLRAD4-218ENST00000592991 NT5C1AQ9BXI3 368 aa27.25■■□□□ 1.95
LDLRAD4-218ENST00000592991 CCDC85CA6NKD9 419 aa27.24■■□□□ 1.95
LDLRAD4-218ENST00000592991 ZBBXA8MT70 800 aa27.24■■□□□ 1.95
LDLRAD4-218ENST00000592991 A8MXQ7 604 aa27.24■■□□□ 1.95
LDLRAD4-218ENST00000592991 ZNF500O60304 480 aaPredicted RBP27.24■■□□□ 1.95
LDLRAD4-218ENST00000592991 C12orf29Q8N999 325 aa27.24■■□□□ 1.95
LDLRAD4-218ENST00000592991 PDCL3Q9H2J4 239 aa27.24■■□□□ 1.95
LDLRAD4-218ENST00000592991 SNX25Q9H3E2 840 aa27.24■■□□□ 1.95
LDLRAD4-218ENST00000592991 PAEPP09466 180 aa27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 GNL1P36915 607 aaPredicted RBP27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 SLC11A1P49279 550 aa27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 CCDC142Q17RM4 750 aa27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 LRRC43Q8N309 656 aa27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 RSPH1Q8WYR4 309 aa27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 HEXIM2Q96MH2 286 aaKnown RBP27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 HTATIP2Q9BUP3 242 aa27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 MRPL9Q9BYD2 267 aaKnown RBP27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 DUSP10Q9Y6W6 482 aa27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 NT5C1B-RDH14C9J2C7 533 aa27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 NRP1O14786 923 aa27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 WARSP23381 471 aaKnown RBP27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 ACAT1P24752 427 aaKnown RBP27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 BCAR1P56945 870 aa27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 ZNF677Q86XU0 584 aa27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 C16orf45Q96MC5 204 aaPredicted RBP27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 RNF216Q9NWF9 866 aaPredicted RBP27.23■■□□□ 1.95
LDLRAD4-218ENST00000592991 CCP110O43303 1012 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms