RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 CGRRF1Q99675 332 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 COLEC11Q9BWP8 271 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 EDEM3Q9BZQ6 932 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 TUBGCP4Q9UGJ1 667 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 PRG3Q9Y2Y8 225 aaPredicted RBP12.79□□□□□ -0.36
DDX39A-219ENST00000592927 TPRP12270 2363 aaKnown RBP12.79□□□□□ -0.36
DDX39A-219ENST00000592927 CHD8Q9HCK8 2581 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 AKR1B15C9JRZ8 316 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-219ENST00000592927 NRP1O14786 923 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 P4HA2O15460 535 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 N4BP1O75113 896 aaKnown RBP12.78□□□□□ -0.36
DDX39A-219ENST00000592927 TNNC2P02585 160 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 TMEM191BP0C7N4 346 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 RPL9P32969 192 aaKnown RBP12.78□□□□□ -0.36
DDX39A-219ENST00000592927 PPM1AP35813 382 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 PBX3P40426 434 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 VAMP7P51809 220 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 SOX4Q06945 474 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-219ENST00000592927 SYCP1Q15431 976 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 DUOXA2Q1HG44 320 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 DCAF17Q5H9S7 520 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-219ENST00000592927 TCERG1LQ5VWI1 586 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 EFCAB13Q8IY85 973 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 CCDC105Q8IYK2 499 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 DCLK2Q8N568 766 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 VN1R2Q8NFZ6 395 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 TMC2Q8TDI7 906 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 PARD3BQ8TEW8 1205 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 POF1BQ8WVV4 589 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 ANKRD36BP1Q96IX9 119 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 APOL5Q9BWW9 433 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 GOLGA2P5Q9HBQ8 144 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 DPP3Q9NY33 737 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 SPG21Q9NZD8 308 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 CACNG4Q9UBN1 327 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 R4GN57 208 aa12.78□□□□□ -0.36
DDX39A-219ENST00000592927 FNDC1Q4ZHG4 1894 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-219ENST00000592927 ACACBO00763 2458 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 A0A1W2PQJ5 194 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 NT5C1B-RDH14C9J2C7 533 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 PODXLO00592 558 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 PMM2O15305 246 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 TADA2AO75478 443 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 CLCNKBP51801 687 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 GUCY2FP51841 1108 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 AP3M2P53677 418 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 KRT17Q04695 432 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 CETN1Q12798 172 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 UPP1Q16831 310 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 LMBRD2Q68DH5 695 aaPredicted RBP12.77□□□□□ -0.37
DDX39A-219ENST00000592927 CWF19L1Q69YN2 538 aaKnown RBP12.77□□□□□ -0.37
DDX39A-219ENST00000592927 DCLRE1AQ6PJP8 1040 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 SLC39A11Q8N1S5 342 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 DTWD2Q8NBA8 298 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 KLHL23Q8NBE8 558 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 ZNF397Q8NF99 534 aaPredicted RBP12.77□□□□□ -0.37
DDX39A-219ENST00000592927 NEK11Q8NG66 645 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 OR5B17Q8NGF7 314 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 PLEKHO2Q8TD55 490 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 MICAL1Q8TDZ2 1067 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 RABGGTAQ92696 567 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 TMEM169Q96HH4 297 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 PCMTD1Q96MG8 357 aaPredicted RBP12.77□□□□□ -0.37
DDX39A-219ENST00000592927 PAAF1Q9BRP4 392 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 MTMR12Q9C0I1 747 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 S1PR5Q9H228 398 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 SIK3Q9Y2K2 1263 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 ZKSCAN5Q9Y2L8 839 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 R3HCC1Q9Y3T6 440 aaKnown RBP12.77□□□□□ -0.37
DDX39A-219ENST00000592927 DAAM1Q9Y4D1 1078 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 ATG2AQ2TAZ0 1938 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 CHD6Q8TD26 2715 aa12.77□□□□□ -0.37
DDX39A-219ENST00000592927 EP300Q09472 2414 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-219ENST00000592927 LRRIQ3A6PVS8 624 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-219ENST00000592927 MFAP3LO75121 409 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 FGF18O76093 207 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 B3GAT3O94766 335 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 GYPCP04921 128 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 TRIM49P0CI25 452 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 TRIM49CP0CI26 452 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 TRIM21P19474 475 aaKnown RBP12.76□□□□□ -0.37
DDX39A-219ENST00000592927 LRPAP1P30533 357 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 GTF2H1P32780 548 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 FMO5P49326 533 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 DLG4P78352 724 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 CLDN10P78369 228 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 EXOC3L4Q17RC7 722 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 C9orf57Q5W0N0 161 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 GBP6Q6ZN66 633 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 ZSCAN30Q86W11 494 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 TMEM173Q86WV6 379 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-219ENST00000592927 RUBCNQ92622 972 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 IGSF21Q96ID5 467 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 FAM84AQ96KN4 292 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 PANX2Q96RD6 677 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 TTYH3Q9C0H2 523 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 PLCB1Q9NQ66 1216 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 MARCH5Q9NX47 278 aa12.76□□□□□ -0.37
DDX39A-219ENST00000592927 PUF60Q9UHX1 559 aaKnown RBP12.76□□□□□ -0.37
DDX39A-219ENST00000592927 ITGA11Q9UKX5 1188 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms