RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 SPTLC2O15270 562 aa17.36■□□□□ 0.37
CIRBP-240ENST00000592815 PRPF6O94906 941 aaKnown RBP17.36■□□□□ 0.37
CIRBP-240ENST00000592815 LDHAP00338 332 aaKnown RBP17.36■□□□□ 0.37
CIRBP-240ENST00000592815 TUFMP49411 452 aaKnown RBP17.36■□□□□ 0.37
CIRBP-240ENST00000592815 WNT7BP56706 349 aa17.36■□□□□ 0.37
CIRBP-240ENST00000592815 ALCAMQ13740 583 aa17.36■□□□□ 0.37
CIRBP-240ENST00000592815 FOXD4L5Q5VV16 416 aaPredicted RBP17.36■□□□□ 0.37
CIRBP-240ENST00000592815 GPIHBP1Q8IV16 184 aa17.36■□□□□ 0.37
CIRBP-240ENST00000592815 CCDC65Q8IXS2 484 aa17.36■□□□□ 0.37
CIRBP-240ENST00000592815 MAML2Q8IZL2 1156 aaPredicted RBP17.36■□□□□ 0.37
CIRBP-240ENST00000592815 FAM200AQ8TCP9 573 aa17.36■□□□□ 0.37
CIRBP-240ENST00000592815 NOC3LQ8WTT2 800 aaKnown RBP17.36■□□□□ 0.37
CIRBP-240ENST00000592815 FOXD4L4Q8WXT5 416 aaPredicted RBP17.36■□□□□ 0.37
CIRBP-240ENST00000592815 IRF7Q92985 503 aa17.36■□□□□ 0.37
CIRBP-240ENST00000592815 ZNF396Q96N95 335 aaPredicted RBP17.36■□□□□ 0.37
CIRBP-240ENST00000592815 SEPT5Q99719 369 aaPredicted RBP17.36■□□□□ 0.37
CIRBP-240ENST00000592815 PCIF1Q9H4Z3 704 aa17.36■□□□□ 0.37
CIRBP-240ENST00000592815 ZNF334Q9HCZ1 680 aaPredicted RBP17.36■□□□□ 0.37
CIRBP-240ENST00000592815 HSFX1Q9UBD0 423 aa17.36■□□□□ 0.37
CIRBP-240ENST00000592815 MRPS17Q9Y2R5 130 aaKnown RBP17.36■□□□□ 0.37
CIRBP-240ENST00000592815 DMDP11532 3685 aa17.36■□□□□ 0.37
CIRBP-240ENST00000592815 COL4A3Q01955 1670 aa17.36■□□□□ 0.37
CIRBP-240ENST00000592815 CFAP54Q96N23 3096 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 FAM186AA6NE01 2351 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 HEPACAM2A8MVW5 462 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 ZNF263O14978 683 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 NCAM2O15394 837 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 LAMTOR5O43504 91 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 GARTP22102 1010 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 TARSP26639 723 aaKnown RBP17.35■□□□□ 0.37
CIRBP-240ENST00000592815 MGAT5BQ3V5L5 792 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 SV2CQ496J9 727 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 ITIH5Q86UX2 942 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 LRRTM3Q86VH5 581 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 MFSD6LQ8IWD5 586 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 BRSK2Q8IWQ3 736 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 CACTINQ8WUQ7 758 aaKnown RBP17.35■□□□□ 0.37
CIRBP-240ENST00000592815 DEPDC1BQ8WUY9 529 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 PSMG2Q969U7 264 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 E2F7Q96AV8 911 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 CLDN23Q96B33 292 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 CBWD1Q9BRT8 395 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 ATXN3LQ9H3M9 355 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 SEMA4AQ9H3S1 761 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 TMEM206Q9H813 350 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 RBAKQ9NYW8 714 aaPredicted RBP17.35■□□□□ 0.37
CIRBP-240ENST00000592815 AGAP1Q9UPQ3 857 aa17.35■□□□□ 0.37
CIRBP-240ENST00000592815 SHISA7A6NL88 538 aa17.34■□□□□ 0.37
CIRBP-240ENST00000592815 MAN2B1O00754 1011 aa17.34■□□□□ 0.37
CIRBP-240ENST00000592815 EXTL3O43909 919 aa17.34■□□□□ 0.37
CIRBP-240ENST00000592815 PPP6R2O75170 966 aa17.34■□□□□ 0.37
CIRBP-240ENST00000592815 LMNAP02545 664 aaKnown RBP17.34■□□□□ 0.37
CIRBP-240ENST00000592815 POLR2BP30876 1174 aaKnown RBP17.34■□□□□ 0.37
CIRBP-240ENST00000592815 PNPLA4P41247 253 aa17.34■□□□□ 0.37
CIRBP-240ENST00000592815 STXBP5Q5T5C0 1151 aa17.34■□□□□ 0.37
CIRBP-240ENST00000592815 GAREM2Q75VX8 874 aa17.34■□□□□ 0.37
CIRBP-240ENST00000592815 ARID3BQ8IVW6 561 aaPredicted RBP17.34■□□□□ 0.37
CIRBP-240ENST00000592815 YAF2Q8IY57 180 aa17.34■□□□□ 0.37
CIRBP-240ENST00000592815 CSGALNACT2Q8N6G5 542 aa17.34■□□□□ 0.37
CIRBP-240ENST00000592815 RSPRY1Q96DX4 576 aa17.34■□□□□ 0.37
CIRBP-240ENST00000592815 ZNF560Q96MR9 790 aa17.34■□□□□ 0.37
CIRBP-240ENST00000592815 LPIN3Q9BQK8 851 aa17.34■□□□□ 0.37
CIRBP-240ENST00000592815 LRRC27Q9C0I9 530 aa17.34■□□□□ 0.37
CIRBP-240ENST00000592815 NDRG2Q9UN36 371 aaKnown RBP17.34■□□□□ 0.37
CIRBP-240ENST00000592815 CACNA1IQ9P0X4 2223 aa17.33■□□□□ 0.37
CIRBP-240ENST00000592815 FGF19O95750 216 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 ITGB3P05106 788 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 GABRR2P28476 465 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 MAGEA9P43362 315 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 CSTF1Q05048 431 aaKnown RBP17.33■□□□□ 0.36
CIRBP-240ENST00000592815 SMARCB1Q12824 385 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 FZD5Q13467 585 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 VEPH1Q14D04 833 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 E2F4Q16254 413 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 TAF12Q16514 161 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 FOXD4L6Q3SYB3 417 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-240ENST00000592815 SCARA3Q6AZY7 606 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 ZC3H14Q6PJT7 736 aaKnown RBP17.33■□□□□ 0.36
CIRBP-240ENST00000592815 FOXD4L3Q6VB84 417 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-240ENST00000592815 DCP1BQ8IZD4 617 aaKnown RBP17.33■□□□□ 0.36
CIRBP-240ENST00000592815 C1orf127Q8N9H9 656 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 GIPC2Q8TF65 315 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 C2orf15Q8WU43 125 aaKnown RBP17.33■□□□□ 0.36
CIRBP-240ENST00000592815 HPS3Q969F9 1004 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 SNX21Q969T3 373 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 FAM84AQ96KN4 292 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 PDE11AQ9HCR9 933 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 TRPV5Q9NQA5 729 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 ABI2Q9NYB9 513 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-240ENST00000592815 WDR87Q6ZQQ6 2873 aa17.33■□□□□ 0.36
CIRBP-240ENST00000592815 NCANO14594 1321 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 CUTAO60888 179 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 HAPLN1P10915 354 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-240ENST00000592815 ATF6P18850 670 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 RPS9P46781 194 aaKnown RBP17.32■□□□□ 0.36
CIRBP-240ENST00000592815 AMPD3Q01432 767 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 BFSP1Q12934 665 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 ARHGAP15Q53QZ3 475 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 GPR158Q5T848 1215 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 STXBP4Q6ZWJ1 553 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms