RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 ECE1P42892 770 aa18.96■□□□□ 0.63
SPC24-206ENST00000592540 QARSP47897 775 aaKnown RBP18.96■□□□□ 0.63
SPC24-206ENST00000592540 GEMIN4P57678 1058 aaKnown RBP18.96■□□□□ 0.63
SPC24-206ENST00000592540 NOP14P78316 857 aaKnown RBP18.96■□□□□ 0.63
SPC24-206ENST00000592540 CYP24A1Q07973 514 aa18.96■□□□□ 0.63
SPC24-206ENST00000592540 ATP13A4Q4VNC1 1196 aa18.96■□□□□ 0.63
SPC24-206ENST00000592540 RNASEH2BQ5TBB1 312 aaKnown RBP18.96■□□□□ 0.63
SPC24-206ENST00000592540 RNF220Q5VTB9 566 aa18.96■□□□□ 0.63
SPC24-206ENST00000592540 GALNT15Q8N3T1 639 aa18.96■□□□□ 0.63
SPC24-206ENST00000592540 KCNH7Q9NS40 1196 aa18.96■□□□□ 0.63
SPC24-206ENST00000592540 CPSF2Q9P2I0 782 aaKnown RBP18.96■□□□□ 0.63
SPC24-206ENST00000592540 A0A0G2JND7 137 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 G3V3G9 751 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 ATP2A1O14983 1001 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 DHX15O43143 795 aaKnown RBP18.95■□□□□ 0.62
SPC24-206ENST00000592540 YWHABP31946 246 aaKnown RBP18.95■□□□□ 0.62
SPC24-206ENST00000592540 DSG3P32926 999 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 PIK3CAP42336 1068 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 GPX6P59796 221 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 SLC34A1Q06495 639 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 SEPT7Q16181 437 aaKnown RBP18.95■□□□□ 0.62
SPC24-206ENST00000592540 DCAF8Q5TAQ9 597 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 MAP4K3Q8IVH8 894 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 NSL1Q96IY1 281 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 FAM84AQ96KN4 292 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 FBXL18Q96ME1 805 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 MRPL47Q9HD33 250 aaKnown RBP18.95■□□□□ 0.62
SPC24-206ENST00000592540 C1orf112Q9NSG2 853 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 SCOCQ9UIL1 159 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 RABGEF1Q9UJ41 708 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 NFASCO94856 1347 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 NRXN2Q9P2S2 1712 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 RGPD3A6NKT7 1758 aaPredicted RBP18.95■□□□□ 0.62
SPC24-206ENST00000592540 RGPD4Q7Z3J3 1758 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 CAPN9O14815 690 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 GYG2O15488 501 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 ATP9AO75110 1047 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 BANF1O75531 89 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 PSMG1O95456 288 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 CFHP08603 1231 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 FAM102BQ5T8I3 360 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 LRRC74BQ6ZQY2 392 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 USP37Q86T82 979 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 ANKMY2Q8IV38 441 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 RCOR2Q8IZ40 523 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 TMEM161BQ8NDZ6 487 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 POMGNT1Q8WZA1 660 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 IFT43Q96FT9 208 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 SLITRK1Q96PX8 696 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 KIFC3Q9BVG8 833 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 TRIM55Q9BYV6 548 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 RANBP17Q9H2T7 1088 aaKnown RBP18.95■□□□□ 0.62
SPC24-206ENST00000592540 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.95■□□□□ 0.62
SPC24-206ENST00000592540 WDR35Q9P2L0 1181 aa18.95■□□□□ 0.62
SPC24-206ENST00000592540 ZC3H11AO75152 810 aaKnown RBP eCLIP18.94■□□□□ 0.62
SPC24-206ENST00000592540 ATF7P17544 494 aaPredicted RBP18.94■□□□□ 0.62
SPC24-206ENST00000592540 BPIFB4P59827 614 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 ZC3H12AQ5D1E8 599 aaKnown RBP18.94■□□□□ 0.62
SPC24-206ENST00000592540 FAM182BQ5T319 152 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 TRMT1LQ7Z2T5 733 aaKnown RBP18.94■□□□□ 0.62
SPC24-206ENST00000592540 NLRX1Q86UT6 975 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 EGFL6Q8IUX8 553 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 TCP10LQ8TDR4 215 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 ZFAND2BQ8WV99 257 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 TIPINQ9BVW5 301 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 MANSC1Q9H8J5 431 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 SHOC2Q9UQ13 582 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 DRG1Q9Y295 367 aaKnown RBP18.94■□□□□ 0.62
SPC24-206ENST00000592540 TLR3O15455 904 aaKnown RBP18.94■□□□□ 0.62
SPC24-206ENST00000592540 TBX10O75333 385 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 TJP3O95049 919 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 LYPLA2O95372 231 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 GCLCP48506 637 aaPredicted RBP18.94■□□□□ 0.62
SPC24-206ENST00000592540 SPP2Q13103 211 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 EFTUD2Q15029 972 aaKnown RBP eCLIP18.94■□□□□ 0.62
SPC24-206ENST00000592540 PLEKHA7Q6IQ23 1121 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 PASD1Q8IV76 773 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 RBM41Q96IZ5 413 aaKnown RBP18.94■□□□□ 0.62
SPC24-206ENST00000592540 VPS11Q9H270 941 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 C12orf65Q9H3J6 166 aaKnown RBP18.94■□□□□ 0.62
SPC24-206ENST00000592540 SYNCQ9H7C4 482 aa18.94■□□□□ 0.62
SPC24-206ENST00000592540 METTL5Q9NRN9 209 aaKnown RBP18.94■□□□□ 0.62
SPC24-206ENST00000592540 CLUHO75153 1309 aa18.93■□□□□ 0.62
SPC24-206ENST00000592540 KLRG2A4D1S0 409 aaPredicted RBP18.93■□□□□ 0.62
SPC24-206ENST00000592540 TM9SF1O15321 606 aa18.93■□□□□ 0.62
SPC24-206ENST00000592540 ARFIP2P53365 341 aa18.93■□□□□ 0.62
SPC24-206ENST00000592540 AOC3Q16853 763 aa18.93■□□□□ 0.62
SPC24-206ENST00000592540 ZFYVE27Q5T4F4 411 aa18.93■□□□□ 0.62
SPC24-206ENST00000592540 SLC39A4Q6P5W5 647 aa18.93■□□□□ 0.62
SPC24-206ENST00000592540 MFSD7Q6UXD7 560 aa18.93■□□□□ 0.62
SPC24-206ENST00000592540 PHC3Q8NDX5 983 aa18.93■□□□□ 0.62
SPC24-206ENST00000592540 MCUR1Q96AQ8 359 aa18.93■□□□□ 0.62
SPC24-206ENST00000592540 FETUBQ9UGM5 382 aa18.93■□□□□ 0.62
SPC24-206ENST00000592540 DENND3A2RUS2 1198 aa18.92■□□□□ 0.62
SPC24-206ENST00000592540 GOLGA8SH3BPF8 625 aa18.92■□□□□ 0.62
SPC24-206ENST00000592540 GOLGA8MH3BSY2 632 aa18.92■□□□□ 0.62
SPC24-206ENST00000592540 PLSCR1O15162 318 aa18.92■□□□□ 0.62
SPC24-206ENST00000592540 DNAJC6O75061 913 aa18.92■□□□□ 0.62
SPC24-206ENST00000592540 NPM3O75607 178 aaKnown RBP18.92■□□□□ 0.62
SPC24-206ENST00000592540 TCF4P15884 667 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms