RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 PCDHA11Q9Y5I1 949 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 LOXHD1Q8IVV2 1947 aa8.52□□□□□ -1.05
VMP1-213ENST00000591877 NID2Q14112 1375 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 COL4A4P53420 1690 aaPredicted RBP8.51□□□□□ -1.05
VMP1-213ENST00000591877 C17orf102A2RUQ5 167 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 BAIAP3O94812 1187 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 CA3P07451 260 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 SNRPB2P08579 225 aaKnown RBP8.51□□□□□ -1.05
VMP1-213ENST00000591877 RPS6KB1P23443 525 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 TCF7P36402 384 aaPredicted RBP8.51□□□□□ -1.05
VMP1-213ENST00000591877 NAPAP54920 295 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 WDR5P61964 334 aaKnown RBP8.51□□□□□ -1.05
VMP1-213ENST00000591877 DEFB103AP81534 67 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 CYP27A1Q02318 531 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 NTRK3Q16288 839 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 UTP14CQ5TAP6 766 aaKnown RBP8.51□□□□□ -1.05
VMP1-213ENST00000591877 BLOC1S2Q6QNY1 142 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 ATG4DQ86TL0 474 aaPredicted RBP8.51□□□□□ -1.05
VMP1-213ENST00000591877 HERC6Q8IVU3 1022 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 FBXL16Q8N461 479 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 ATL2Q8NHH9 583 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 PHOSPHO2Q8TCD6 241 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 ATP6V0A1Q93050 837 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 MAGEB10Q96LZ2 347 aaPredicted RBP8.51□□□□□ -1.05
VMP1-213ENST00000591877 PCYT2Q99447 389 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 ZFYVE21Q9BQ24 234 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 ORAI3Q9BRQ5 295 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 RC3H2Q9HBD1 1191 aaKnown RBP8.51□□□□□ -1.05
VMP1-213ENST00000591877 JADE2Q9NQC1 790 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 SETD4Q9NVD3 440 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 GFOD1Q9NXC2 390 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 BARHL2Q9NY43 387 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 G3BP2Q9UN86 482 aaKnown RBP8.51□□□□□ -1.05
VMP1-213ENST00000591877 FAN1Q9Y2M0 1017 aa8.51□□□□□ -1.05
VMP1-213ENST00000591877 SMCO2A6NFE2 343 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 EPOPA6NHQ4 379 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 hCG_1984214I3L0E3 225 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 AQP7O14520 342 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 OPA1O60313 960 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 BRINP1O60477 761 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 EOMESO95936 686 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 GSNP06396 782 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 ARP10275 920 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 METAP2P50579 478 aaKnown RBP eCLIP8.5□□□□□ -1.05
VMP1-213ENST00000591877 EVCP57679 992 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 MTMR1Q13613 665 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 TESK1Q15569 626 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 PFKFB3Q16875 520 aaPredicted RBP8.5□□□□□ -1.05
VMP1-213ENST00000591877 RNF219Q5W0B1 726 aaPredicted RBP8.5□□□□□ -1.05
VMP1-213ENST00000591877 CNKSR3Q6P9H4 555 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 RSPO2Q6UXX9 243 aaPredicted RBP8.5□□□□□ -1.05
VMP1-213ENST00000591877 UBR7Q8N806 425 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 ZNF713Q8N859 430 aaPredicted RBP8.5□□□□□ -1.05
VMP1-213ENST00000591877 DTWD2Q8NBA8 298 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 TMEM145Q8NBT3 493 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 GIMAP8Q8ND71 665 aaPredicted RBP8.5□□□□□ -1.05
VMP1-213ENST00000591877 CRYGNQ8WXF5 182 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 SEPT1Q8WYJ6 367 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 MXRA8Q9BRK3 442 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 ANO3Q9BYT9 981 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 C1GALT1Q9NS00 363 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 KCNH7Q9NS40 1196 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 CHST7Q9NS84 486 aa8.5□□□□□ -1.05
VMP1-213ENST00000591877 TPX2Q9ULW0 747 aaKnown RBP8.5□□□□□ -1.05
VMP1-213ENST00000591877 TNPO3Q9Y5L0 923 aaKnown RBP8.5□□□□□ -1.05
VMP1-213ENST00000591877 PRRC2BQ5JSZ5 2229 aaKnown RBP8.49□□□□□ -1.05
VMP1-213ENST00000591877 TCRBV16S1A1N1A0A5B0 115 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 LCHNA4D1U4 455 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 RSPH10B2B2RC85 870 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 RFXAPO00287 272 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 MEIS1O00470 390 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 MAFGO15525 162 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 PRPF3O43395 683 aaKnown RBP8.49□□□□□ -1.05
VMP1-213ENST00000591877 EDIL3O43854 480 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 REC8O95072 547 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 FOSP01100 380 aaPredicted RBP8.49□□□□□ -1.05
VMP1-213ENST00000591877 RSPH10BP0C881 870 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 SCG2P13521 617 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 PDIA3P30101 505 aaKnown RBP8.49□□□□□ -1.05
VMP1-213ENST00000591877 SREBF1P36956 1147 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 THPOP40225 353 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 KCNJ6P48051 423 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 ADCY7P51828 1080 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 EPHB1P54762 984 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 POU4F1Q01851 419 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 TAP1Q03518 808 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 ITGB3BPQ13352 177 aaPredicted RBP8.49□□□□□ -1.05
VMP1-213ENST00000591877 SNW1Q13573 536 aaKnown RBP8.49□□□□□ -1.05
VMP1-213ENST00000591877 TOB2Q14106 344 aaPredicted RBP8.49□□□□□ -1.05
VMP1-213ENST00000591877 PPP2R5DQ14738 602 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 SF1Q15637 639 aaKnown RBP8.49□□□□□ -1.05
VMP1-213ENST00000591877 ACBD5Q5T8D3 534 aaPredicted RBP8.49□□□□□ -1.05
VMP1-213ENST00000591877 JAKMIP3Q5VZ66 844 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 ERICH6BQ5W0A0 696 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.49□□□□□ -1.05
VMP1-213ENST00000591877 TEX2Q8IWB9 1127 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 TOP6BLQ8N6T0 577 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 DBF4BQ8NFT6 615 aa8.49□□□□□ -1.05
VMP1-213ENST00000591877 PIWIL2Q8TC59 973 aaKnown RBP8.49□□□□□ -1.05
VMP1-213ENST00000591877 LMBR1Q8WVP7 490 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms