RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 PRCPP42785 496 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 LHX1P48742 406 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 CASP4P49662 377 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 VAMP7P51809 220 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 EPHB3P54753 998 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 DUSP4Q13115 394 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 GPR17Q13304 367 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 PABPC1LQ4VXU2 614 aaKnown RBP10.82□□□□□ -0.68
BRCA1-227ENST00000591849 SLC39A12Q504Y0 691 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 CYP4A22Q5TCH4 519 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 INTS8Q75QN2 995 aaKnown RBP10.82□□□□□ -0.68
BRCA1-227ENST00000591849 DPH6Q7L8W6 267 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 FAM186BQ8IYM0 893 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 ADGRF2Q8IZF7 708 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 TOP6BLQ8N6T0 577 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 TMC2Q8TDI7 906 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 PARD3BQ8TEW8 1205 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 SYAP1Q96A49 352 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-227ENST00000591849 GBP4Q96PP9 640 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 CORO1BQ9BR76 489 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 RHOBTB2Q9BYZ6 727 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.82□□□□□ -0.687e-7■□□□□ 9.9
BRCA1-227ENST00000591849 NXF1Q9UBU9 619 aaKnown RBP10.82□□□□□ -0.68
BRCA1-227ENST00000591849 MUTYHQ9UIF7 546 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 SIX4Q9UIU6 781 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 MAN1B1Q9UKM7 699 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 SLC27A5Q9Y2P5 690 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 MRPS23Q9Y3D9 190 aaKnown RBP10.82□□□□□ -0.68
BRCA1-227ENST00000591849 INSL5Q9Y5Q6 135 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 PTPRJQ12913 1337 aa10.82□□□□□ -0.68
BRCA1-227ENST00000591849 LRRIQ3A6PVS8 624 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-227ENST00000591849 BIN1O00499 593 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 ZNF197O14709 1029 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 CST3P01034 146 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-227ENST00000591849 PCSK1P29120 753 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 ATICP31939 592 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 TUFMP49411 452 aaKnown RBP10.81□□□□□ -0.68
BRCA1-227ENST00000591849 CDR1P51861 262 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 MYL6P60660 151 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 NTHL1P78549 312 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 TWF1Q12792 350 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 SMARCB1Q12824 385 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 VEPH1Q14D04 833 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 CAMK4Q16566 473 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 EDRF1Q3B7T1 1238 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 WDR72Q3MJ13 1102 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 MGAT5BQ3V5L5 792 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 KLHL10Q6JEL2 608 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 ZDHHC14Q8IZN3 488 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 PDCL2Q8N4E4 241 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 ATAD1Q8NBU5 361 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 CCDC150Q8NCX0 1101 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 OR6B3Q8NGW1 331 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 FEZF2Q8TBJ5 459 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 BORCS6Q96GS4 357 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 TMEM209Q96SK2 561 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 SEPT5Q99719 369 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-227ENST00000591849 ZCWPW1Q9H0M4 648 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 MMRN2Q9H8L6 949 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 C11orf16Q9NQ32 467 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 GDAP2Q9NXN4 497 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 DDX43Q9NXZ2 648 aaKnown RBP10.81□□□□□ -0.68
BRCA1-227ENST00000591849 PCDHB5Q9Y5E4 795 aa10.81□□□□□ -0.68
BRCA1-227ENST00000591849 TCHHQ07283 1943 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 TRIP11Q15643 1979 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 MTMR11A4FU01 709 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 MAPK13O15264 365 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 STX10O60499 249 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 POU2F2P09086 479 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 PDGFRBP09619 1106 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 MYL4P12829 197 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 P4HA1P13674 534 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 HOXD11P31277 338 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-227ENST00000591849 GNL1P36915 607 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-227ENST00000591849 PIK3CAP42336 1068 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 FKBP3Q00688 224 aaKnown RBP10.8□□□□□ -0.68
BRCA1-227ENST00000591849 NCOA4Q13772 614 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 NFE2Q16621 373 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-227ENST00000591849 NFIL3Q16649 462 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 SGSM1Q2NKQ1 1148 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 ZNF699Q32M78 642 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 ZNF667Q5HYK9 610 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 CENPPQ6IPU0 288 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 PDZD4Q76G19 769 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-227ENST00000591849 ITIH5Q86UX2 942 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 OR10T2Q8NGX3 314 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 SPATA20Q8TB22 786 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 SPATA18Q8TC71 538 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 TMEM174Q8WUU8 243 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 ZNF516Q92618 1163 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 KHSRPQ92945 711 aaKnown RBP eCLIP10.8□□□□□ -0.684e-9■■■□□ 15.2
BRCA1-227ENST00000591849 DHTKD1Q96HY7 919 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-227ENST00000591849 ACBD6Q9BR61 282 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 IMPG2Q9BZV3 1241 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 HCFC1R1Q9NWW0 138 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 ABI2Q9NYB9 513 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-227ENST00000591849 DNMT3BQ9UBC3 853 aaKnown RBP10.8□□□□□ -0.68
BRCA1-227ENST00000591849 L1RE1Q9UN81 338 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 YIPF1Q9Y548 306 aa10.8□□□□□ -0.68
BRCA1-227ENST00000591849 WDFY4Q6ZS81 3184 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms