RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 FBXL5Q9UKA1 691 aa20.52■□□□□ 0.88
DDX39A-214ENST00000590556 CDY1Q9Y6F8 540 aa20.52■□□□□ 0.88
DDX39A-214ENST00000590556 TSC2P49815 1807 aa20.51■□□□□ 0.87
DDX39A-214ENST00000590556 TBC1D4O60343 1298 aa20.51■□□□□ 0.87
DDX39A-214ENST00000590556 FAM163BP0C2L3 166 aa20.51■□□□□ 0.87
DDX39A-214ENST00000590556 OR1D2P34982 312 aa20.51■□□□□ 0.87
DDX39A-214ENST00000590556 MIIPQ5JXC2 388 aa20.51■□□□□ 0.87
DDX39A-214ENST00000590556 RSPO2Q6UXX9 243 aaPredicted RBP20.51■□□□□ 0.87
DDX39A-214ENST00000590556 SCARA5Q6ZMJ2 495 aa20.51■□□□□ 0.87
DDX39A-214ENST00000590556 EHBP1Q8NDI1 1231 aa20.51■□□□□ 0.87
DDX39A-214ENST00000590556 SPATA18Q8TC71 538 aa20.51■□□□□ 0.87
DDX39A-214ENST00000590556 PPM1EQ8WY54 764 aa20.51■□□□□ 0.87
DDX39A-214ENST00000590556 NIF3L1Q9GZT8 377 aa20.51■□□□□ 0.87
DDX39A-214ENST00000590556 SMYD3Q9H7B4 428 aa20.51■□□□□ 0.87
DDX39A-214ENST00000590556 LIMA1Q9UHB6 759 aaKnown RBP20.51■□□□□ 0.87
DDX39A-214ENST00000590556 FSD2A1L4K1 749 aa20.5■□□□□ 0.87
DDX39A-214ENST00000590556 OR6C75A6NL08 312 aa20.5■□□□□ 0.87
DDX39A-214ENST00000590556 GOLGA6L19H0YKK7 550 aa20.5■□□□□ 0.87
DDX39A-214ENST00000590556 ADAM12O43184 909 aa20.5■□□□□ 0.87
DDX39A-214ENST00000590556 TACC1O75410 805 aa20.5■□□□□ 0.87
DDX39A-214ENST00000590556 GTF2F1P35269 517 aaKnown RBP eCLIP20.5■□□□□ 0.87
DDX39A-214ENST00000590556 LHX1P48742 406 aa20.5■□□□□ 0.87
DDX39A-214ENST00000590556 ARPP19P56211 112 aa20.5■□□□□ 0.87
DDX39A-214ENST00000590556 GBP6Q6ZN66 633 aa20.5■□□□□ 0.87
DDX39A-214ENST00000590556 PPFIBP1Q86W92 1011 aa20.5■□□□□ 0.87
DDX39A-214ENST00000590556 PALB2Q86YC2 1186 aa20.5■□□□□ 0.87
DDX39A-214ENST00000590556 MRPL45Q9BRJ2 306 aaKnown RBP20.5■□□□□ 0.87
DDX39A-214ENST00000590556 VPS16Q9H269 839 aa20.5■□□□□ 0.87
DDX39A-214ENST00000590556 SNX25Q9H3E2 840 aa20.5■□□□□ 0.87
DDX39A-214ENST00000590556 GCNT4Q9P109 453 aa20.5■□□□□ 0.87
DDX39A-214ENST00000590556 GTPBP10A4D1E9 387 aaKnown RBP20.49■□□□□ 0.87
DDX39A-214ENST00000590556 NCK2O43639 380 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 ATP1A3P13637 1013 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 WARSP23381 471 aaKnown RBP20.49■□□□□ 0.87
DDX39A-214ENST00000590556 ASPAP45381 313 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 RAP1GAPP47736 663 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 COPB1P53618 953 aaKnown RBP20.49■□□□□ 0.87
DDX39A-214ENST00000590556 CDH8P55286 799 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 LRMPQ12912 555 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 RAB33AQ14088 237 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 SLC8B1Q6J4K2 584 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 OSTM1Q86WC4 334 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 EFHBQ8N7U6 833 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 LMO3Q8TAP4 145 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 KBTBD7Q8WVZ9 684 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 TATDN2Q93075 761 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 FAXDC2Q96IV6 333 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 RTP3Q9BQQ7 232 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 CRACR2AQ9BSW2 395 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 INTS2Q9H0H0 1204 aaKnown RBP20.49■□□□□ 0.87
DDX39A-214ENST00000590556 DDX43Q9NXZ2 648 aaKnown RBP20.49■□□□□ 0.87
DDX39A-214ENST00000590556 STXBP5LQ9Y2K9 1186 aa20.49■□□□□ 0.87
DDX39A-214ENST00000590556 LRRC10BA6NIK2 292 aa20.48■□□□□ 0.87
DDX39A-214ENST00000590556 GABRDO14764 452 aa20.48■□□□□ 0.87
DDX39A-214ENST00000590556 GLUD1P00367 558 aa20.48■□□□□ 0.87
DDX39A-214ENST00000590556 WEE2P0C1S8 567 aa20.48■□□□□ 0.87
DDX39A-214ENST00000590556 GNL1P36915 607 aaPredicted RBP20.48■□□□□ 0.87
DDX39A-214ENST00000590556 CLCN4P51793 760 aa20.48■□□□□ 0.87
DDX39A-214ENST00000590556 LLGL2Q6P1M3 1020 aa20.48■□□□□ 0.87
DDX39A-214ENST00000590556 OR6B3Q8NGW1 331 aa20.48■□□□□ 0.87
DDX39A-214ENST00000590556 OR10T2Q8NGX3 314 aa20.48■□□□□ 0.87
DDX39A-214ENST00000590556 MAFAQ8NHW3 353 aaPredicted RBP20.48■□□□□ 0.87
DDX39A-214ENST00000590556 SLC22A17Q8WUG5 538 aa20.48■□□□□ 0.87
DDX39A-214ENST00000590556 NT5C1BQ96P26 610 aa20.48■□□□□ 0.87
DDX39A-214ENST00000590556 BCO2Q9BYV7 579 aa20.48■□□□□ 0.87
DDX39A-214ENST00000590556 SDCBP2Q9H190 292 aa20.48■□□□□ 0.87
DDX39A-214ENST00000590556 CYP3A43Q9HB55 503 aa20.48■□□□□ 0.87
DDX39A-214ENST00000590556 CPB1P15086 417 aa20.47■□□□□ 0.87
DDX39A-214ENST00000590556 PCSK1P29120 753 aa20.47■□□□□ 0.87
DDX39A-214ENST00000590556 TSPY1Q01534 308 aa20.47■□□□□ 0.87
DDX39A-214ENST00000590556 ROR1Q01973 937 aa20.47■□□□□ 0.87
DDX39A-214ENST00000590556 SKIV2LQ15477 1246 aaKnown RBP20.47■□□□□ 0.87
DDX39A-214ENST00000590556 EXOC3L4Q17RC7 722 aa20.47■□□□□ 0.87
DDX39A-214ENST00000590556 FKBP15Q5T1M5 1219 aa20.47■□□□□ 0.87
DDX39A-214ENST00000590556 ACBD6Q9BR61 282 aa20.47■□□□□ 0.87
DDX39A-214ENST00000590556 HCFC2Q9Y5Z7 792 aa20.47■□□□□ 0.87
DDX39A-214ENST00000590556 LINC01565O15544 149 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 TGM5O43548 720 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 C1RP00736 705 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 PDGFRBP09619 1106 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 OR4Q2P0C623 313 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 SPATA31D3P0C874 917 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 SRGAP2BP0DMP2 458 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 EPCAMP16422 314 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 SLC9A1P19634 815 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 ACAT1P24752 427 aaKnown RBP20.46■□□□□ 0.87
DDX39A-214ENST00000590556 LMO2P25791 158 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 ADAM15Q13444 863 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 CUL2Q13617 745 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 LILRA6Q6PI73 481 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 EP400NLQ6ZTU2 488 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 SPATA31D4Q6ZUB0 917 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 TMEM209Q96SK2 561 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 ANP32EQ9BTT0 268 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 ZCWPW1Q9H0M4 648 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 CLDND1Q9NY35 253 aa20.46■□□□□ 0.87
DDX39A-214ENST00000590556 PLXNA3P51805 1871 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 WDR27A2RRH5 827 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 LGALS16A8MUM7 142 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 A8MXQ7 604 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms