RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 PEX1O43933 1283 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 ZWINTO95229 277 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 CLPTM1O96005 669 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 TFAP2AP05549 437 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 IVDP26440 423 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 MTTPP55157 894 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 EIF6P56537 245 aaKnown RBP15.99■□□□□ 0.15
CIRBP-228ENST00000590347 PPIDQ08752 370 aaKnown RBP15.99■□□□□ 0.15
CIRBP-228ENST00000590347 C16orf72Q14CZ0 275 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 KRT25Q7Z3Z0 450 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 SAPCD2Q86UD0 394 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 PPM1KQ8N3J5 372 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 DGCR14Q96DF8 476 aaKnown RBP15.99■□□□□ 0.15
CIRBP-228ENST00000590347 PRPF18Q99633 342 aaKnown RBP15.99■□□□□ 0.15
CIRBP-228ENST00000590347 PLVAPQ9BX97 442 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 MRPL1Q9BYD6 325 aaKnown RBP15.99■□□□□ 0.15
CIRBP-228ENST00000590347 TRIM55Q9BYV6 548 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 MKNK2Q9HBH9 465 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 SAP30BPQ9UHR5 308 aaKnown RBP15.99■□□□□ 0.15
CIRBP-228ENST00000590347 RARBP10826 455 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 LMNB1P20700 586 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 CD151P48509 253 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 PDE1BQ01064 536 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 CYP4A11Q02928 519 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 DCTN2Q13561 401 aaKnown RBP15.99■□□□□ 0.15
CIRBP-228ENST00000590347 TBC1D10BQ4KMP7 808 aaPredicted RBP15.99■□□□□ 0.15
CIRBP-228ENST00000590347 EPC2Q52LR7 807 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 COBLL1Q53SF7 1204 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 RALGPS1Q5JS13 557 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 RHBDF2Q6PJF5 856 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 ACAD11Q709F0 780 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 TMPRSS6Q8IU80 811 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 RUSC1Q9BVN2 902 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 DCP1AQ9NPI6 582 aaPredicted RBP15.99■□□□□ 0.15
CIRBP-228ENST00000590347 SAR1AQ9NR31 198 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 BUD23O43709 281 aaKnown RBP15.99■□□□□ 0.15
CIRBP-228ENST00000590347 GCNT3O95395 438 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 SLC5A2P31639 672 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 GAD2Q05329 585 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 UBAP2LQ14157 1087 aaKnown RBP15.99■□□□□ 0.15
CIRBP-228ENST00000590347 CCDC92Q53HC0 331 aaPredicted RBP15.99■□□□□ 0.15
CIRBP-228ENST00000590347 TCHHL1Q5QJ38 904 aaPredicted RBP15.99■□□□□ 0.15
CIRBP-228ENST00000590347 CYFIP1Q7L576 1253 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 TSSK1BQ9BXA7 367 aa15.99■□□□□ 0.15
CIRBP-228ENST00000590347 ZNF804BA4D1E1 1349 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 PMLP29590 882 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 NPEPPSP55786 919 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 RABGAP1LQ5R372 815 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 ZFYVE27Q5T4F4 411 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 SLC7A5P1Q8MH63 180 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 CCDC110Q8TBZ0 833 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 MECRQ9BV79 373 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 CLEC11AQ9Y240 323 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 COL22A1Q8NFW1 1626 aaPredicted RBP15.98■□□□□ 0.15
CIRBP-228ENST00000590347 NR3C1P04150 777 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 SMIM18P0DKX4 95 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 CRABP2P29373 138 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 SSTR3P32745 418 aaPredicted RBP15.98■□□□□ 0.15
CIRBP-228ENST00000590347 PDK1Q15118 436 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 IFNLR1Q8IU57 520 aaPredicted RBP15.98■□□□□ 0.15
CIRBP-228ENST00000590347 ZBED8Q8IZ13 594 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 NUP85Q9BW27 656 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 LRRC27Q9C0I9 530 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 C10orf88Q9H8K7 445 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 C6orf50Q9HD87 102 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 SELENONQ9NZV5 590 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 PCDHA2Q9Y5H9 948 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 NCANO14594 1321 aa15.98■□□□□ 0.15
CIRBP-228ENST00000590347 TMEM247A6NEH6 219 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 TMX2-CTNND1H3BSU7 103 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 EDIL3O43854 480 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 MSX2P35548 267 aaPredicted RBP15.97■□□□□ 0.15
CIRBP-228ENST00000590347 RGS2P41220 211 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 GSTM4Q03013 218 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 PDIA2Q13087 525 aaKnown RBP15.97■□□□□ 0.15
CIRBP-228ENST00000590347 PPP6R3Q5H9R7 873 aaPredicted RBP15.97■□□□□ 0.15
CIRBP-228ENST00000590347 KAZNQ674X7 775 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 PDSS2Q86YH6 399 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 TMIGD2Q96BF3 282 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 MTMR9Q96QG7 549 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 QTRT2Q9H974 415 aaKnown RBP15.97■□□□□ 0.15
CIRBP-228ENST00000590347 CYLDQ9NQC7 956 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 PTTG2Q9NZH5 202 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 CNTNAP4Q9C0A0 1308 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 ZMPSTE24O75844 475 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 RXRBP28702 533 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 ENTPD1P49961 510 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 KPNA1P52294 538 aaPredicted RBP15.97■□□□□ 0.15
CIRBP-228ENST00000590347 ZNF200P98182 395 aaPredicted RBP15.97■□□□□ 0.15
CIRBP-228ENST00000590347 FOLH1Q04609 750 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 CYTH1Q15438 398 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 CLEC10AQ8IUN9 316 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 PPP4R1Q8TF05 950 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 GIPC3Q8TF64 312 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 DCUN1D5Q9BTE7 237 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 KCNK13Q9HB14 408 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.97■□□□□ 0.15
CIRBP-228ENST00000590347 XPO1O14980 1071 aaKnown RBP15.97■□□□□ 0.15
CIRBP-228ENST00000590347 E2F6O75461 281 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 TSPY3P0CV98 308 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms