RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 ASGR2P07307 311 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 KRT13P13646 458 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 FSHRP23945 695 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 ACAT1P24752 427 aaKnown RBP15.08■□□□□ 0
SCAMP4-212ENST00000590266 MYL6P60660 151 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 TNNC1P63316 161 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 DUSP4Q13115 394 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 GPR17Q13304 367 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 STIM1Q13586 685 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 MYBPC2Q14324 1141 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 PABPC1LQ4VXU2 614 aaKnown RBP15.08■□□□□ 0
SCAMP4-212ENST00000590266 TDRD10Q5VZ19 366 aaKnown RBP15.08■□□□□ 0
SCAMP4-212ENST00000590266 KLHL10Q6JEL2 608 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 TCEAL8Q8IYN2 117 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 ELMOD1Q8N336 334 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 ATAD1Q8NBU5 361 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 ST13P5Q8NFI4 369 aaPredicted RBP15.08■□□□□ 0
SCAMP4-212ENST00000590266 SPATA20Q8TB22 786 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 ING5Q8WYH8 240 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 ELMO3Q96BJ8 720 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 SEPT5Q99719 369 aaPredicted RBP15.08■□□□□ 0
SCAMP4-212ENST00000590266 RTP3Q9BQQ7 232 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 CORO1BQ9BR76 489 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 C11orf16Q9NQ32 467 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 DDX43Q9NXZ2 648 aaKnown RBP15.08■□□□□ 0
SCAMP4-212ENST00000590266 YIPF1Q9Y548 306 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 CITO14578 2027 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 PLXNA3P51805 1871 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 MTMR11A4FU01 709 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 TRIM49BA6NDI0 452 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 HCRTO43612 131 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 N4BP1O75113 896 aaKnown RBP15.07■□□□□ 0
SCAMP4-212ENST00000590266 TRIM49P0CI25 452 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 TRIM49CP0CI26 452 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 PSMC2P35998 433 aaKnown RBP15.07■□□□□ 0
SCAMP4-212ENST00000590266 VAMP7P51809 220 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 TSPY1Q01534 308 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 SOWAHAQ2M3V2 549 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 WDR72Q3MJ13 1102 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 ZCWPW2Q504Y3 356 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 TTC9BQ8N6N2 239 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 MYADMQ96S97 322 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 ZCWPW1Q9H0M4 648 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 CRISPLD1Q9H336 500 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.07■□□□□ 04e-7■■■■■ 57.7
SCAMP4-212ENST00000590266 GDAP2Q9NXN4 497 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 ABI2Q9NYB9 513 aaPredicted RBP15.07■□□□□ 0
SCAMP4-212ENST00000590266 DNMT3BQ9UBC3 853 aaKnown RBP15.07■□□□□ 0
SCAMP4-212ENST00000590266 NXF1Q9UBU9 619 aaKnown RBP15.07■□□□□ 0
SCAMP4-212ENST00000590266 USTQ9Y2C2 406 aa15.07■□□□□ 0
SCAMP4-212ENST00000590266 PSMA7O14818 248 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 CETN3O15182 167 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 VNN2O95498 520 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 RHOP08100 348 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 EPB41P11171 864 aaKnown RBP15.06■□□□□ 0
SCAMP4-212ENST00000590266 PIK3CAP42336 1068 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 ALDH1A3P47895 512 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 PMS1P54277 932 aaKnown RBP15.06■□□□□ 0
SCAMP4-212ENST00000590266 MYL7Q01449 175 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 NCOA4Q13772 614 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 NFIL3Q16649 462 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 ZNF699Q32M78 642 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 EDRF1Q3B7T1 1238 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 MGAT5BQ3V5L5 792 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 ANKRD40Q6AI12 368 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 IQCEQ6IPM2 695 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 SCARA5Q6ZMJ2 495 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 OSTM1Q86WC4 334 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 ELOA2Q8IYF1 753 aaPredicted RBP15.06■□□□□ 0
SCAMP4-212ENST00000590266 DCP1BQ8IZD4 617 aaKnown RBP15.06■□□□□ 0
SCAMP4-212ENST00000590266 ADSSL1Q8N142 457 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 TMEM86AQ8N2M4 240 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 PLCD3Q8N3E9 789 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 TOP6BLQ8N6T0 577 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 ITFG1Q8TB96 612 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 FAM200AQ8TCP9 573 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 TMC2Q8TDI7 906 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 SYAP1Q96A49 352 aaPredicted RBP15.06■□□□□ 0
SCAMP4-212ENST00000590266 ZNF512Q96ME7 567 aaPredicted RBP15.06■□□□□ 0
SCAMP4-212ENST00000590266 RHOBTB2Q9BYZ6 727 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 GTPBP4Q9BZE4 634 aaKnown RBP15.06■□□□□ 0
SCAMP4-212ENST00000590266 C5orf42Q9H799 3197 aa15.06■□□□□ 0
SCAMP4-212ENST00000590266 VWA8A3KMH1 1905 aa15.05■□□□□ 0
SCAMP4-212ENST00000590266 PDGFRBP09619 1106 aa15.05■□□□□ -0
SCAMP4-212ENST00000590266 CD44P16070 742 aaKnown RBP15.05■□□□□ -0
SCAMP4-212ENST00000590266 PTPN2P17706 415 aa15.05■□□□□ -0
SCAMP4-212ENST00000590266 GCLMP48507 274 aa15.05■□□□□ -0
SCAMP4-212ENST00000590266 AP3M2P53677 418 aa15.05■□□□□ -0
SCAMP4-212ENST00000590266 EPHB3P54753 998 aa15.05■□□□□ -0
SCAMP4-212ENST00000590266 PSMC1P62191 440 aaKnown RBP15.05■□□□□ -0
SCAMP4-212ENST00000590266 CCDC142Q17RM4 750 aa15.05■□□□□ -0
SCAMP4-212ENST00000590266 CENPPQ6IPU0 288 aa15.05■□□□□ -0
SCAMP4-212ENST00000590266 INTS8Q75QN2 995 aaKnown RBP15.05■□□□□ -0
SCAMP4-212ENST00000590266 RTL10Q7L3V2 364 aa15.05■□□□□ -0
SCAMP4-212ENST00000590266 LRRTM3Q86VH5 581 aa15.05■□□□□ -0
SCAMP4-212ENST00000590266 ZDHHC14Q8IZN3 488 aa15.05■□□□□ -0
SCAMP4-212ENST00000590266 HS6ST3Q8IZP7 471 aa15.05■□□□□ -0
SCAMP4-212ENST00000590266 TMEM174Q8WUU8 243 aa15.05■□□□□ -0
SCAMP4-212ENST00000590266 GBP4Q96PP9 640 aa15.05■□□□□ -0
SCAMP4-212ENST00000590266 SNX25Q9H3E2 840 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms