RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 SCN1AP35498 2009 aa18.89■□□□□ 0.61
H3F3B-207ENST00000589417 LRRIQ3A6PVS8 624 aaPredicted RBP18.88■□□□□ 0.61
H3F3B-207ENST00000589417 PRRG1O14668 218 aa18.88■□□□□ 0.61
H3F3B-207ENST00000589417 AKAP3O75969 853 aa18.88■□□□□ 0.61
H3F3B-207ENST00000589417 KRT19P08727 400 aa18.88■□□□□ 0.61
H3F3B-207ENST00000589417 NR2F2P24468 414 aa18.88■□□□□ 0.61
H3F3B-207ENST00000589417 ATICP31939 592 aa18.88■□□□□ 0.61
H3F3B-207ENST00000589417 PPP1R2P41236 205 aa18.88■□□□□ 0.61
H3F3B-207ENST00000589417 ADAM9Q13443 819 aa18.88■□□□□ 0.61
H3F3B-207ENST00000589417 SOWAHAQ2M3V2 549 aa18.88■□□□□ 0.61
H3F3B-207ENST00000589417 FOXR2Q6PJQ5 311 aa18.88■□□□□ 0.61
H3F3B-207ENST00000589417 SMYD4Q8IYR2 804 aaPredicted RBP18.88■□□□□ 0.61
H3F3B-207ENST00000589417 C2orf15Q8WU43 125 aaKnown RBP18.88■□□□□ 0.61
H3F3B-207ENST00000589417 ACBD6Q9BR61 282 aa18.88■□□□□ 0.61
H3F3B-207ENST00000589417 MKNK1Q9BUB5 465 aa18.88■□□□□ 0.61
H3F3B-207ENST00000589417 DNMT3BQ9UBC3 853 aaKnown RBP18.88■□□□□ 0.61
H3F3B-207ENST00000589417 SNX9Q9Y5X1 595 aa18.88■□□□□ 0.61
H3F3B-207ENST00000589417 MTMR11A4FU01 709 aa18.87■□□□□ 0.61
H3F3B-207ENST00000589417 CCL16O15467 120 aa18.87■□□□□ 0.61
H3F3B-207ENST00000589417 N4BP1O75113 896 aaKnown RBP18.87■□□□□ 0.61
H3F3B-207ENST00000589417 MICAL2O94851 1124 aa18.87■□□□□ 0.61
H3F3B-207ENST00000589417 OR4Q2P0C623 313 aa18.87■□□□□ 0.61
H3F3B-207ENST00000589417 PSMC2P35998 433 aaKnown RBP18.87■□□□□ 0.61
H3F3B-207ENST00000589417 LHX1P48742 406 aa18.87■□□□□ 0.61
H3F3B-207ENST00000589417 BFSP1Q12934 665 aa18.87■□□□□ 0.61
H3F3B-207ENST00000589417 ZACNQ401N2 412 aa18.87■□□□□ 0.61
H3F3B-207ENST00000589417 C1orf220Q5T0J3 134 aa18.87■□□□□ 0.61
H3F3B-207ENST00000589417 INTS8Q75QN2 995 aaKnown RBP18.87■□□□□ 0.61
H3F3B-207ENST00000589417 GRASPQ7Z6J2 395 aaPredicted RBP18.87■□□□□ 0.61
H3F3B-207ENST00000589417 ERCC4Q92889 916 aaPredicted RBP18.87■□□□□ 0.61
H3F3B-207ENST00000589417 TMEM209Q96SK2 561 aa18.87■□□□□ 0.61
H3F3B-207ENST00000589417 C1QTNF1Q9BXJ1 281 aa18.87■□□□□ 0.61
H3F3B-207ENST00000589417 XYLT2Q9H1B5 865 aa18.87■□□□□ 0.61
H3F3B-207ENST00000589417 MAN1B1Q9UKM7 699 aa18.87■□□□□ 0.61
H3F3B-207ENST00000589417 LRG1P02750 347 aa18.86■□□□□ 0.61
H3F3B-207ENST00000589417 PTPN2P17706 415 aa18.86■□□□□ 0.61
H3F3B-207ENST00000589417 LRRC63Q05C16 580 aa18.86■□□□□ 0.61
H3F3B-207ENST00000589417 MORC3Q14149 939 aa18.86■□□□□ 0.61
H3F3B-207ENST00000589417 TDRD10Q5VZ19 366 aaKnown RBP18.86■□□□□ 0.61
H3F3B-207ENST00000589417 CEP135Q66GS9 1140 aa18.86■□□□□ 0.61
H3F3B-207ENST00000589417 LRRTM3Q86VH5 581 aa18.86■□□□□ 0.61
H3F3B-207ENST00000589417 DCP1BQ8IZD4 617 aaKnown RBP18.86■□□□□ 0.61
H3F3B-207ENST00000589417 EDAQ92838 391 aa18.86■□□□□ 0.61
H3F3B-207ENST00000589417 NXPE3Q969Y0 559 aa18.86■□□□□ 0.61
H3F3B-207ENST00000589417 DHTKD1Q96HY7 919 aaPredicted RBP18.86■□□□□ 0.61
H3F3B-207ENST00000589417 IPO9Q96P70 1041 aaKnown RBP18.86■□□□□ 0.61
H3F3B-207ENST00000589417 CRISPLD1Q9H336 500 aa18.86■□□□□ 0.61
H3F3B-207ENST00000589417 TSHZ2Q9NRE2 1034 aa18.86■□□□□ 0.61
H3F3B-207ENST00000589417 MUTYHQ9UIF7 546 aa18.86■□□□□ 0.61
H3F3B-207ENST00000589417 GPR37L1O60883 481 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 TACC1O75410 805 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 LAMP2P13473 410 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 BMP6P22004 513 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 WARSP23381 471 aaKnown RBP18.85■□□□□ 0.61
H3F3B-207ENST00000589417 FSHRP23945 695 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 TUFMP49411 452 aaKnown RBP18.85■□□□□ 0.61
H3F3B-207ENST00000589417 VAMP7P51809 220 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 EPHA5P54756 1037 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 DLG4P78352 724 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 FKBP3Q00688 224 aaKnown RBP18.85■□□□□ 0.61
H3F3B-207ENST00000589417 DUSP4Q13115 394 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 PLD1Q13393 1074 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 PTPN21Q16825 1174 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 SV2AQ7L0J3 742 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 ATAD1Q8NBU5 361 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 LEMD2Q8NC56 503 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 KBTBD7Q8WVZ9 684 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 SYAP1Q96A49 352 aaPredicted RBP18.85■□□□□ 0.61
H3F3B-207ENST00000589417 MYADMQ96S97 322 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 PKMYT1Q99640 499 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 IGSF9Q9P2J2 1179 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 DENND4AQ7Z401 1863 aa18.85■□□□□ 0.61
H3F3B-207ENST00000589417 TULP1O00294 542 aaPredicted RBP18.84■□□□□ 0.61
H3F3B-207ENST00000589417 CETN3O15182 167 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 PCSK1P29120 753 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 GTF2H1P32780 548 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 MYL6P60660 151 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 MYL7Q01449 175 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 TRPC3Q13507 836 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 NFE2Q16621 373 aaPredicted RBP18.84■□□□□ 0.61
H3F3B-207ENST00000589417 PABPC1LQ4VXU2 614 aaKnown RBP18.84■□□□□ 0.61
H3F3B-207ENST00000589417 ANKRD40Q6AI12 368 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 OSTM1Q86WC4 334 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 FAM186BQ8IYM0 893 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 ADGRF2Q8IZF7 708 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 TRIML1Q8N9V2 468 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 SPPL2BQ8TCT7 592 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 TAF4BQ92750 862 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 DDX43Q9NXZ2 648 aaKnown RBP18.84■□□□□ 0.61
H3F3B-207ENST00000589417 CEP72Q9P209 647 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 LIMD1Q9UGP4 676 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 YIPF1Q9Y548 306 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 ASB3Q9Y575 518 aa18.84■□□□□ 0.61
H3F3B-207ENST00000589417 PPP1R3GB7ZBB8 358 aa18.83■□□□□ 0.6
H3F3B-207ENST00000589417 ANHXE9PGG2 379 aa18.83■□□□□ 0.6
H3F3B-207ENST00000589417 VNN1O95497 513 aa18.83■□□□□ 0.6
H3F3B-207ENST00000589417 RHOP08100 348 aa18.83■□□□□ 0.6
H3F3B-207ENST00000589417 SP100P23497 879 aaPredicted RBP18.83■□□□□ 0.6
H3F3B-207ENST00000589417 CCNE1P24864 410 aa18.83■□□□□ 0.6
H3F3B-207ENST00000589417 PMS1P54277 932 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms