RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 INO80B-WBP1J3KQ70 363 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 MYO1FO00160 1098 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 THAP12O43422 761 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 PROSCO94903 275 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 LGALS2P05162 132 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 IVLP07476 585 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 FAM153BP0C7A2 387 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 SRGAP2CP0DJJ0 459 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 MCF2P10911 925 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 TAP1Q03518 808 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 ZNF699Q32M78 642 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 FAM153CQ494X1 144 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 DUPD1Q68J44 220 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 PLEKHA7Q6IQ23 1121 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 EFCAB12Q6NXP0 572 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 MAMDC4Q6UXC1 1216 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 SYDE1Q6ZW31 735 aaPredicted RBP10.58□□□□□ -0.72
VPS25-202ENST00000589219 ZBTB33Q86T24 672 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 IQCKQ8N0W5 287 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 LINC01465Q8N7H1 131 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 COPS5Q92905 334 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 NLRP4Q96MN2 994 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 FMO2Q99518 471 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 ERP44Q9BS26 406 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 TSEN34Q9BSV6 310 aaKnown RBP10.58□□□□□ -0.72
VPS25-202ENST00000589219 INO80BQ9C086 356 aaPredicted RBP10.58□□□□□ -0.72
VPS25-202ENST00000589219 ZNF518BQ9C0D4 1074 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 MTMR12Q9C0I1 747 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 CDT1Q9H211 546 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 PRDM5Q9NQX1 630 aaPredicted RBP10.58□□□□□ -0.72
VPS25-202ENST00000589219 ADAM22Q9P0K1 906 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 FAM153AQ9UHL3 310 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 CEP83Q9Y592 693 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 UMODL1Q5DID0 1318 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 MROH7Q68CQ1 1323 aa10.58□□□□□ -0.72
VPS25-202ENST00000589219 DAPK3O43293 454 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 ZEB2O60315 1214 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 SHOX2O60902 331 aaPredicted RBP10.57□□□□□ -0.72
VPS25-202ENST00000589219 PGK1P00558 417 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 ZNF865P0CJ78 1059 aaPredicted RBP10.57□□□□□ -0.72
VPS25-202ENST00000589219 HOXD8P13378 290 aaPredicted RBP10.57□□□□□ -0.72
VPS25-202ENST00000589219 RRM1P23921 792 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 TMOD1P28289 359 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 CDH5P33151 784 aaPredicted RBP10.57□□□□□ -0.72
VPS25-202ENST00000589219 ACTN2P35609 894 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 TNFSF9P41273 254 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 CLCN3P51790 818 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 GYS2P54840 703 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 SKOR1P84550 965 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 TRIM60Q495X7 471 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 FAM109BQ6ICB4 259 aaPredicted RBP10.57□□□□□ -0.72
VPS25-202ENST00000589219 TAPT1Q6NXT6 567 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 RUFY4Q6ZNE9 571 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 TMC3Q7Z5M5 1100 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 PRELID2Q8N945 189 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 GRK7Q8WTQ7 553 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 RIN2Q8WYP3 895 aaPredicted RBP10.57□□□□□ -0.72
VPS25-202ENST00000589219 SLCO2A1Q92959 643 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 MAGOHBQ96A72 148 aaKnown RBP10.57□□□□□ -0.72
VPS25-202ENST00000589219 CYFIP2Q96F07 1278 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 FAM84AQ96KN4 292 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 HINFPQ9BQA5 517 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 C11orf70Q9BRQ4 267 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 TRIM51Q9BSJ1 452 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 CELF4Q9BZC1 486 aaKnown RBP10.57□□□□□ -0.72
VPS25-202ENST00000589219 ABHD16BQ9H3Z7 469 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 FAM124BQ9H5Z6 455 aaPredicted RBP10.57□□□□□ -0.72
VPS25-202ENST00000589219 RPF1Q9H9Y2 349 aaKnown RBP10.57□□□□□ -0.72
VPS25-202ENST00000589219 SPC25Q9HBM1 224 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 ERVK-5Q9HDB9 667 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 PARVAQ9NVD7 372 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.57□□□□□ -0.72
VPS25-202ENST00000589219 CWC15Q9P013 229 aaKnown RBP10.57□□□□□ -0.72
VPS25-202ENST00000589219 CALCOCO1Q9P1Z2 691 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 MTRF1LQ9UGC7 380 aaKnown RBP10.57□□□□□ -0.72
VPS25-202ENST00000589219 PCDHGC3Q9UN70 934 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 MCM3APO60318 1980 aa10.57□□□□□ -0.72
VPS25-202ENST00000589219 LAMA2P24043 3122 aaKnown RBP10.57□□□□□ -0.72
VPS25-202ENST00000589219 A0A1W2PQ45 241 aaPredicted RBP10.56□□□□□ -0.72
VPS25-202ENST00000589219 A0A1W2PQY0 241 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 MOXD2PA6NHM9 499 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 TTLL13PA6NNM8 815 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 FSCN2O14926 492 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 MED7O43513 233 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 DUSP11O75319 330 aaKnown RBP10.56□□□□□ -0.72
VPS25-202ENST00000589219 PPFIA2O75334 1257 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 ECEL1O95672 775 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 PYGMP11217 842 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 HSD17B3P37058 310 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 COILP38432 576 aaPredicted RBP10.56□□□□□ -0.72
VPS25-202ENST00000589219 PTGIRP43119 386 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 EIF3BP55884 814 aaKnown RBP10.56□□□□□ -0.72
VPS25-202ENST00000589219 MYL6P60660 151 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 TLE2Q04725 743 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 SIX1Q15475 284 aaPredicted RBP10.56□□□□□ -0.72
VPS25-202ENST00000589219 TTMPQ5BVD1 217 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 CCDC137Q6PK04 289 aaKnown RBP10.56□□□□□ -0.72
VPS25-202ENST00000589219 APBB1IPQ7Z5R6 666 aaPredicted RBP10.56□□□□□ -0.72
VPS25-202ENST00000589219 CROCCP2Q86T23 111 aa10.56□□□□□ -0.72
VPS25-202ENST00000589219 RHOT1Q8IXI2 618 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms