RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 CCHCR1Q8TD31 782 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 FBXO41Q8TF61 875 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 TIFAQ96CG3 184 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 CDK5RAP3Q96JB5 506 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 CLPTM1LQ96KA5 538 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 CGRRF1Q99675 332 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 MRI1Q9BV20 369 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 DDX21Q9NR30 783 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMAD4-207ENST00000589076 LANCL2Q9NS86 450 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 TMEM140Q9NV12 185 aa4.37□□□□□ -1.71
SMAD4-207ENST00000589076 ARPP21Q9UBL0 812 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-207ENST00000589076 TRGV11A0A075B6L2 103 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 MGST3O14880 152 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 TEX33O43247 280 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 ZBED1O96006 694 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 FTLP02792 175 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-207ENST00000589076 HOXB6P17509 224 aaKnown RBP4.36□□□□□ -1.71
SMAD4-207ENST00000589076 DDCP20711 480 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 GUCY1A2P33402 732 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 MAP2K6P52564 334 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 AGFG1P52594 562 aaKnown RBP4.36□□□□□ -1.71
SMAD4-207ENST00000589076 VAV2P52735 878 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 HK3P52790 923 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 SOX10P56693 466 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 HDAC1Q13547 482 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-207ENST00000589076 SAFBQ15424 915 aaKnown RBP eCLIP4.36□□□□□ -1.71
SMAD4-207ENST00000589076 ANO6Q4KMQ2 910 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 CCDC157Q569K6 752 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 PPP4R4Q6NUP7 873 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 C1QL2Q7Z5L3 287 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 C11orf96Q7Z7L8 435 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 LNX2Q8N448 690 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 SH2D3CQ8N5H7 860 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 PJA1Q8NG27 643 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 PPP1R35Q8TAP8 253 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 CASKIN2Q8WXE0 1202 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 RGMAQ96B86 450 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 FAM167AQ96KS9 214 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 MRGPRX4Q96LA9 322 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 ZNF778Q96MU6 729 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 DMRTA2Q96SC8 542 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 SENP6Q9GZR1 1112 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-207ENST00000589076 ZNF700Q9H0M5 742 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 CPNE5Q9HCH3 593 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 ZNF70Q9UC06 446 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-207ENST00000589076 STXBP5LQ9Y2K9 1186 aa4.36□□□□□ -1.71
SMAD4-207ENST00000589076 MYBBP1AQ9BQG0 1328 aaKnown RBP4.36□□□□□ -1.71
SMAD4-207ENST00000589076 COL3A1P02461 1466 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-207ENST00000589076 A0A088AWK7 358 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 WDR91A4D1P6 747 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 FAM227AF5H4B4 570 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 ADCY6O43306 1168 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 AMY1AP04745 511 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 MYBP10242 640 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 CKBP12277 381 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 ALAS1P13196 640 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 ALOX15P16050 662 aaPredicted RBP4.35□□□□□ -1.71
SMAD4-207ENST00000589076 RHCEP18577 417 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 GCSHP23434 173 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 HTR1BP28222 390 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 FOLR3P41439 243 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 GPSM2P81274 684 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 RHDQ02161 417 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 TARDBPQ13148 414 aaKnown RBP eCLIP4.35□□□□□ -1.71
SMAD4-207ENST00000589076 NOGQ13253 232 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 UBE4AQ14139 1066 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 UBXN2BQ14CS0 331 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 CYP2A13Q16696 494 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 KHDC1Q4VXA5 237 aaKnown RBP4.35□□□□□ -1.71
SMAD4-207ENST00000589076 COBLL1Q53SF7 1204 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 NPNTQ6UXI9 565 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 GADL1Q6ZQY3 521 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 DAAM2Q86T65 1068 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 TRMT2AQ8IZ69 625 aaKnown RBP4.35□□□□□ -1.71
SMAD4-207ENST00000589076 KIAA0319LQ8IZA0 1049 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 Q8N9P0 234 aaPredicted RBP4.35□□□□□ -1.71
SMAD4-207ENST00000589076 C9orf106Q8NAJ2 232 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 REPS2Q8NFH8 660 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 KLHDC4Q8TBB5 520 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 HASPINQ8TF76 798 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 MED15Q96RN5 788 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 TIMP4Q99727 224 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 BRIP1Q9BX63 1249 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 IL17RBQ9NRM6 502 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 FAM30AQ9NZY2 134 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 L1RE1Q9UN81 338 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 NR2E3Q9Y5X4 410 aa4.35□□□□□ -1.71
SMAD4-207ENST00000589076 ANO9A1A5B4 782 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 CAPN8A6NHC0 703 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 A6NNZ2 444 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 TPP1O14773 563 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 GPR32O75388 356 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 NBPF7P0C2Y1 421 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-207ENST00000589076 FTH1P19P0C7X4 201 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 SMARCA1P28370 1054 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 CACNB3P54284 484 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 CTXN1P60606 82 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 FAM193AP78312 1265 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 ATP8B2P98198 1209 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 TLE1Q04724 770 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms