RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 ZBED1O96006 694 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 ZKSCAN1P17029 563 aaPredicted RBP8.89□□□□□ -0.99
ATG4D-210ENST00000588972 PDCP20941 246 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 SPP2Q13103 211 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 MYBPC3Q14896 1274 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 TTC38Q5R3I4 469 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 MBNL2Q5VZF2 373 aaKnown RBP8.89□□□□□ -0.99
ATG4D-210ENST00000588972 BICRALQ6AI39 1079 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 TIGD7Q6NT04 549 aaPredicted RBP8.89□□□□□ -0.99
ATG4D-210ENST00000588972 SKAP1Q86WV1 359 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 MAPKAPK5Q8IW41 473 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 LCORLQ8N3X6 602 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 PPM1NQ8N819 430 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 KBTBD3Q8NAB2 608 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 AUTS2Q8WXX7 1259 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 MAML3Q96JK9 1138 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 GUCD1Q96NT3 240 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 TUBGCP5Q96RT8 1024 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 RIOK1Q9BRS2 568 aaKnown RBP8.89□□□□□ -0.99
ATG4D-210ENST00000588972 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.89□□□□□ -0.99
ATG4D-210ENST00000588972 KCTD10Q9H3F6 313 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 ARMT1Q9H993 441 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 ASB1Q9Y576 335 aa8.89□□□□□ -0.99
ATG4D-210ENST00000588972 FLT1P17948 1338 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 MBD4O95243 580 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 FOSP01100 380 aaPredicted RBP8.88□□□□□ -0.99
ATG4D-210ENST00000588972 CYP2B6P20813 491 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 GJA9P57773 515 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 IRX3P78415 501 aaPredicted RBP8.88□□□□□ -0.99
ATG4D-210ENST00000588972 ZP2Q05996 745 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 MSMPQ1L6U9 139 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 PAN2Q504Q3 1202 aaKnown RBP8.88□□□□□ -0.99
ATG4D-210ENST00000588972 TOGARAM2Q6ZUX3 1019 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 USP45Q70EL2 814 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 SPPL2CQ8IUH8 684 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 LYSMD2Q8IV50 215 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 PRR18Q8N4B5 295 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 HIPK4Q8NE63 616 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 PDZD8Q8NEN9 1154 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 PPP1R35Q8TAP8 253 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 PARD3BQ8TEW8 1205 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 TSPEARQ8WU66 669 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 GJA10Q969M2 543 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 MVB12AQ96EY5 273 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 FSD1Q9BTV5 496 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 FAM204AQ9H8W3 233 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 AS3MTQ9HBK9 375 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 PTPRHQ9HD43 1115 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 KLHL11Q9NVR0 708 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 DPP7Q9UHL4 492 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 NUMBLQ9Y6R0 609 aa8.88□□□□□ -0.99
ATG4D-210ENST00000588972 LTBP2Q14767 1821 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 RNF113AO15541 343 aaKnown RBP8.87□□□□□ -0.99
ATG4D-210ENST00000588972 PRKAB2O43741 272 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 APOL3O95236 402 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 PRLP01236 227 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 HRGP04196 525 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 AOAHP28039 575 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 MAPK4P31152 587 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 HK2P52789 917 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 LGALS4P56470 323 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 CYP4F8P98187 520 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 TRIM25Q14258 630 aaKnown RBP8.87□□□□□ -0.99
ATG4D-210ENST00000588972 LLGL1Q15334 1064 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 ZRSR2Q15696 482 aaKnown RBP8.87□□□□□ -0.99
ATG4D-210ENST00000588972 LRRC26Q2I0M4 334 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 GRAMD1BQ3KR37 738 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 MILR1Q7Z6M3 343 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 ARRDC4Q8NCT1 418 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 FAM156AQ8NDB6 213 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 SDR42E1Q8WUS8 393 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 BCL7CQ8WUZ0 217 aaPredicted RBP8.87□□□□□ -0.99
ATG4D-210ENST00000588972 C1GALT1C1Q96EU7 318 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 SEC62Q99442 399 aaKnown RBP8.87□□□□□ -0.99
ATG4D-210ENST00000588972 NAA15Q9BXJ9 866 aaKnown RBP8.87□□□□□ -0.99
ATG4D-210ENST00000588972 IFT122Q9HBG6 1241 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 RXFP1Q9HBX9 757 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 BTBD7Q9P203 1132 aa8.87□□□□□ -0.99
ATG4D-210ENST00000588972 PUF60Q9UHX1 559 aaKnown RBP8.87□□□□□ -0.99
ATG4D-210ENST00000588972 MYH8P13535 1937 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 H3BML4 177 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 TUSC2O75896 110 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 MYL3P08590 195 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 HOXA7P31268 230 aaPredicted RBP8.86□□□□□ -0.99
ATG4D-210ENST00000588972 RGS2P41220 211 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 BACE1P56817 501 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 CACNB2Q08289 660 aaPredicted RBP8.86□□□□□ -0.99
ATG4D-210ENST00000588972 UBE3CQ15386 1083 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 KIAA1841Q6NSI8 718 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 ZSCAN25Q6NSZ9 544 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 UNQ6494/PRO21346Q6UXR6 183 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 KANSL1Q7Z3B3 1105 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 WFDC3Q8IUB2 231 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 STK11IPQ8N1F8 1099 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 GPRC5AQ8NFJ5 357 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 LBHD1Q9BQE6 289 aaPredicted RBP8.86□□□□□ -0.99
ATG4D-210ENST00000588972 TXNRD2Q9NNW7 524 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 TMOD4Q9NZQ9 345 aa8.86□□□□□ -0.99
ATG4D-210ENST00000588972 HERC5Q9UII4 1024 aaKnown RBP8.86□□□□□ -0.99
ATG4D-210ENST00000588972 FITM1A5D6W6 292 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms