RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 RTN2O75298 545 aa33.07■■■□□ 2.88
CAPNS1-206ENST00000588815 ARHGAP25P42331 645 aa33.07■■■□□ 2.88
CAPNS1-206ENST00000588815 DCLRE1AQ6PJP8 1040 aa33.07■■■□□ 2.88
CAPNS1-206ENST00000588815 VWCEQ96DN2 955 aa33.07■■■□□ 2.88
CAPNS1-206ENST00000588815 TBC1D13Q9NVG8 400 aa33.07■■■□□ 2.88
CAPNS1-206ENST00000588815 MYO1AQ9UBC5 1043 aa33.07■■■□□ 2.88
CAPNS1-206ENST00000588815 PRKAG2Q9UGJ0 569 aa33.07■■■□□ 2.88
CAPNS1-206ENST00000588815 H2AFZP0C0S5 128 aa33.06■■■□□ 2.88
CAPNS1-206ENST00000588815 NDST1P52848 882 aa33.06■■■□□ 2.88
CAPNS1-206ENST00000588815 ZNF394Q53GI3 561 aa33.06■■■□□ 2.88
CAPNS1-206ENST00000588815 H2AFVQ71UI9 128 aa33.06■■■□□ 2.88
CAPNS1-206ENST00000588815 TMEM86AQ8N2M4 240 aa33.06■■■□□ 2.88
CAPNS1-206ENST00000588815 SLC4A11Q8NBS3 891 aa33.06■■■□□ 2.88
CAPNS1-206ENST00000588815 FAM193BQ96PV7 902 aaPredicted RBP33.06■■■□□ 2.88
CAPNS1-206ENST00000588815 PDCL3Q9H2J4 239 aa33.06■■■□□ 2.88
CAPNS1-206ENST00000588815 PCDHGC3Q9UN70 934 aa33.06■■■□□ 2.88
CAPNS1-206ENST00000588815 BTNL10A8MVZ5 291 aa33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 TMEM189-UBE2V1I3L0A0 370 aa33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 RNASELQ05823 741 aaKnown RBP33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 C16orf45Q96MC5 204 aaPredicted RBP33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 CASD1Q96PB1 797 aa33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 CYB561D2O14569 222 aa33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 VDRP11473 427 aa33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 WARSP23381 471 aaKnown RBP33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 ITGB8P26012 769 aa33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 STILQ15468 1287 aa33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 COLGALT2Q8IYK4 626 aa33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 SENP8Q96LD8 212 aa33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 PCDHB18PQ96TA0 734 aa33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 MRPL45Q9BRJ2 306 aaKnown RBP33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 ELOVL4Q9GZR5 314 aa33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 LACRTQ9GZZ8 138 aa33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 PUF60Q9UHX1 559 aaKnown RBP33.05■■■□□ 2.88
CAPNS1-206ENST00000588815 ANKRD62A6NC57 917 aa33.04■■■□□ 2.88
CAPNS1-206ENST00000588815 BAIAP3O94812 1187 aa33.04■■■□□ 2.88
CAPNS1-206ENST00000588815 CYP1A1P04798 512 aaPredicted RBP33.04■■■□□ 2.88
CAPNS1-206ENST00000588815 CSF2RAP15509 400 aa33.04■■■□□ 2.88
CAPNS1-206ENST00000588815 CLEC16AQ2KHT3 1053 aa33.04■■■□□ 2.88
CAPNS1-206ENST00000588815 ZNF518BQ9C0D4 1074 aa33.04■■■□□ 2.88
CAPNS1-206ENST00000588815 L1RE1Q9UN81 338 aa33.04■■■□□ 2.88
CAPNS1-206ENST00000588815 RCCD1A6NED2 376 aa33.03■■■□□ 2.88
CAPNS1-206ENST00000588815 KIF5CO60282 957 aa33.03■■■□□ 2.88
CAPNS1-206ENST00000588815 B3GAT3O94766 335 aa33.03■■■□□ 2.88
CAPNS1-206ENST00000588815 LSM8O95777 96 aaKnown RBP33.03■■■□□ 2.88
CAPNS1-206ENST00000588815 UNGP13051 313 aaPredicted RBP33.03■■■□□ 2.88
CAPNS1-206ENST00000588815 DSTYKQ6XUX3 929 aa33.03■■■□□ 2.88
CAPNS1-206ENST00000588815 PALB2Q86YC2 1186 aa33.03■■■□□ 2.88
CAPNS1-206ENST00000588815 ADGRF2Q8IZF7 708 aa33.03■■■□□ 2.88
CAPNS1-206ENST00000588815 RNF10Q8N5U6 811 aaKnown RBP33.03■■■□□ 2.88
CAPNS1-206ENST00000588815 C3orf58Q8NDZ4 430 aa33.03■■■□□ 2.88
CAPNS1-206ENST00000588815 OR6B3Q8NGW1 331 aa33.03■■■□□ 2.88
CAPNS1-206ENST00000588815 KBTBD7Q8WVZ9 684 aa33.03■■■□□ 2.88
CAPNS1-206ENST00000588815 SNX25Q9H3E2 840 aa33.03■■■□□ 2.88
CAPNS1-206ENST00000588815 TMEM253P0C7T8 217 aa33.02■■■□□ 2.88
CAPNS1-206ENST00000588815 CD19P15391 556 aa33.02■■■□□ 2.88
CAPNS1-206ENST00000588815 ACAD10Q6JQN1 1059 aa33.02■■■□□ 2.88
CAPNS1-206ENST00000588815 TWNKQ96RR1 684 aa33.02■■■□□ 2.88
CAPNS1-206ENST00000588815 IL23AQ9NPF7 189 aa33.02■■■□□ 2.88
CAPNS1-206ENST00000588815 RRAGDQ9NQL2 400 aaPredicted RBP33.02■■■□□ 2.88
CAPNS1-206ENST00000588815 HMGXB4Q9UGU5 601 aa33.02■■■□□ 2.88
CAPNS1-206ENST00000588815 DSEQ9UL01 958 aa33.02■■■□□ 2.88
CAPNS1-206ENST00000588815 GUCA1BQ9UMX6 200 aa33.02■■■□□ 2.88
CAPNS1-206ENST00000588815 CEP83Q9Y592 693 aa33.02■■■□□ 2.88
CAPNS1-206ENST00000588815 A0A0A6YYK5 440 aaPredicted RBP33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 A0A0U1RQJ8 604 aa33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 DDHD2O94830 711 aa33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 AMHP03971 560 aa33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 GNL1P36915 607 aaPredicted RBP33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 LHX1P48742 406 aa33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 GALCP54803 685 aa33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 ETF1P62495 437 aaKnown RBP33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 CENPCQ03188 943 aa33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 PPIGQ13427 754 aaKnown RBP eCLIP33.01■■■□□ 2.882e-7■□□□□ 8.5
CAPNS1-206ENST00000588815 SGO2Q562F6 1265 aa33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 ZNF280BQ86YH2 543 aa33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 CRYBG2Q8N1P7 616 aa33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 PDCL2Q8N4E4 241 aa33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 ATRIPQ8WXE1 791 aa33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 CTNNBL1Q8WYA6 563 aaPredicted RBP33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 PAAF1Q9BRP4 392 aa33.01■■■□□ 2.88
CAPNS1-206ENST00000588815 A8MXQ7 604 aa33■■■□□ 2.87
CAPNS1-206ENST00000588815 M0QZQ0 153 aa33■■■□□ 2.87
CAPNS1-206ENST00000588815 GABRDO14764 452 aa33■■■□□ 2.87
CAPNS1-206ENST00000588815 ODC1P11926 461 aa33■■■□□ 2.87
CAPNS1-206ENST00000588815 TNNT1P13805 278 aa33■■■□□ 2.87
CAPNS1-206ENST00000588815 BRD2P25440 801 aaKnown RBP33■■■□□ 2.87
CAPNS1-206ENST00000588815 CNGA2Q16280 664 aa33■■■□□ 2.87
CAPNS1-206ENST00000588815 TNIP3Q96KP6 325 aa33■■■□□ 2.87
CAPNS1-206ENST00000588815 LHX5Q9H2C1 402 aa33■■■□□ 2.87
CAPNS1-206ENST00000588815 CACNG4Q9UBN1 327 aa33■■■□□ 2.87
CAPNS1-206ENST00000588815 STXBP5LQ9Y2K9 1186 aa33■■■□□ 2.87
CAPNS1-206ENST00000588815 PTPRSQ13332 1948 aa32.99■■■□□ 2.87
CAPNS1-206ENST00000588815 FTLP02792 175 aaPredicted RBP32.99■■■□□ 2.87
CAPNS1-206ENST00000588815 CDH5P33151 784 aaPredicted RBP32.99■■■□□ 2.87
CAPNS1-206ENST00000588815 LIN28BQ6ZN17 250 aaKnown RBP eCLIP32.99■■■□□ 2.87
CAPNS1-206ENST00000588815 LRRC43Q8N309 656 aa32.99■■■□□ 2.87
CAPNS1-206ENST00000588815 TFAP2BQ92481 460 aa32.99■■■□□ 2.87
CAPNS1-206ENST00000588815 TOP1MTQ969P6 601 aa32.99■■■□□ 2.87
CAPNS1-206ENST00000588815 TRIM11Q96F44 468 aa32.99■■■□□ 2.87
CAPNS1-206ENST00000588815 CALR3Q96L12 384 aaKnown RBP32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms