RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 MMS19Q96T76 1030 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 SEPT11Q9NVA2 429 aaKnown RBP12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TAS2R14Q9NYV8 317 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 MYO1AQ9UBC5 1043 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CACNG4Q9UBN1 327 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PCDHGC3Q9UN70 934 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 INPP5FQ9Y2H2 1132 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 NME7Q9Y5B8 376 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CASTOR2A6NHX0 329 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 FANCGO15287 622 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 B4GALT3O60512 393 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 RTN2O75298 545 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CFHP08603 1231 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 FAM163BP0C2L3 166 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TMEM253P0C7T8 217 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 FGFR1P11362 822 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 IBSPP21815 317 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PAX3P23760 479 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 IGFBP6P24592 240 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 BRD2P25440 801 aaKnown RBP12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ITGB8P26012 769 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 NDST1P52848 882 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 GALCP54803 685 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 NOMO3P69849 1222 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CENPCQ03188 943 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CD300LGQ6UXG3 332 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 DPH6Q7L8W6 267 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 DEFB128Q7Z7B8 93 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 UNC93AQ86WB7 457 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 NPAS4Q8IUM7 802 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 RSPH1Q8WYR4 309 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TMEM176AQ96HP8 235 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PAAF1Q9BRP4 392 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 IRX2Q9BZI1 471 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TBC1D13Q9NVG8 400 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 KANSL3Q9P2N6 904 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 GUCA1BQ9UMX6 200 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 L1RE1Q9UN81 338 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 DUSP10Q9Y6W6 482 aa12.71□□□□□ -0.37
TNFRSF11A-203ENST00000587697 BRCA2P51587 3418 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 A0A0A6YYK5 440 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 ANKRD62A6NC57 917 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 TMCO5BA8MYB1 307 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 TMEM189-UBE2V1I3L0A0 370 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 HOXA2O43364 376 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 KIF5CO60282 957 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 LSM8O95777 96 aaKnown RBP12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 VDRP11473 427 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 EN2P19622 333 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 WARSP23381 471 aaKnown RBP12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 CDH5P33151 784 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 TCEAL1Q15170 157 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 ZNF394Q53GI3 561 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 ACAD10Q6JQN1 1059 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 MFSD5Q6N075 450 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 OSTM1Q86WC4 334 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 DNAAF5Q86Y56 855 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 COLGALT2Q8IYK4 626 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 RNF10Q8N5U6 811 aaKnown RBP12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 APPL2Q8NEU8 664 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 SENP8Q96LD8 212 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 CASD1Q96PB1 797 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 WDR24Q96S15 920 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 NT5C1AQ9BXI3 368 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 RNF216Q9NWF9 866 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 SALL4Q9UJQ4 1053 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 KIAA1257Q9ULG3 409 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 PCDHB7Q9Y5E2 793 aa12.7□□□□□ -0.38
TNFRSF11A-203ENST00000587697 O00370 1275 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 CYB561D2O14569 222 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 MED7O43513 233 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 HUS1O60921 280 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 DDHD2O94830 711 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 FTLP02792 175 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 CD19P15391 556 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 RAG1P15918 1043 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 GNG11P61952 73 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 ORC1Q13415 861 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 IKBKEQ14164 716 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 PPP1R2P3Q6NXS1 205 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 SYT10Q6XYQ8 523 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 ZNF280BQ86YH2 543 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 PHF13Q86YI8 300 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 ADGRF2Q8IZF7 708 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 CRYBG2Q8N1P7 616 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 TMEM86AQ8N2M4 240 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 PDCL2Q8N4E4 241 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 SPATA18Q8TC71 538 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 SECISBP2LQ93073 1101 aaKnown RBP12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 CYFIP2Q96F07 1278 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 LHX5Q9H2C1 402 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 PRDM5Q9NQX1 630 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 PUF60Q9UHX1 559 aaKnown RBP12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 LRFN2Q9ULH4 789 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 CAPN6Q9Y6Q1 641 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 GBF1Q92538 1859 aa12.69□□□□□ -0.38
TNFRSF11A-203ENST00000587697 MYO16Q9Y6X6 1858 aa12.68□□□□□ -0.38
TNFRSF11A-203ENST00000587697 ABHD14A-ACY1A0A1B0GW23 586 aa12.68□□□□□ -0.38
TNFRSF11A-203ENST00000587697 MACROD2A1Z1Q3 448 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms