RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 GUCY2FP51841 1108 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 KRT85P78386 507 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 SIM1P81133 766 aaPredicted RBP5.54□□□□□ -1.52
VMP1-205ENST00000587470 MRPS35P82673 323 aaKnown RBP5.54□□□□□ -1.52
VMP1-205ENST00000587470 GEN1Q17RS7 908 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 RSAD1Q9HA92 442 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 KCTD5Q9NXV2 234 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 TRHDEQ9UKU6 1024 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 IPPQ9Y573 584 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 PCDHGA9Q9Y5G4 932 aaKnown RBP5.54□□□□□ -1.52
VMP1-205ENST00000587470 PCDHGA8Q9Y5G5 932 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 PCDHGA7Q9Y5G6 932 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 PCDHGA6Q9Y5G7 932 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 PCDHGA3Q9Y5H0 932 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 MRFAP1Q9Y605 127 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 ABCA6Q8N139 1617 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 KIDINS220Q9ULH0 1771 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 SBNO2Q9Y2G9 1366 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 ITSN2Q9NZM3 1697 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 TRGV11A0A075B6L2 103 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 HTRA2O43464 458 aaPredicted RBP5.53□□□□□ -1.52
VMP1-205ENST00000587470 XPOTO43592 962 aaKnown RBP5.53□□□□□ -1.52
VMP1-205ENST00000587470 AGFG2O95081 481 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 ZFPL1O95159 310 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 TSPY4P0CV99 314 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 TSPY10P0CW01 314 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 FCER1AP12319 257 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 CDK11BP21127 795 aaKnown RBP5.53□□□□□ -1.52
VMP1-205ENST00000587470 PTH2RP49190 550 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 RBM6P78332 1123 aaKnown RBP5.53□□□□□ -1.52
VMP1-205ENST00000587470 MRPS21P82921 87 aaKnown RBP5.53□□□□□ -1.52
VMP1-205ENST00000587470 ITKQ08881 620 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 RAB39AQ14964 217 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 UTP14CQ5TAP6 766 aaKnown RBP5.53□□□□□ -1.52
VMP1-205ENST00000587470 PPP4R3AQ6IN85 833 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 GGT6Q6P531 493 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 FAM98AQ8NCA5 519 aaKnown RBP5.53□□□□□ -1.52
VMP1-205ENST00000587470 RAB24Q969Q5 203 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 FOXJ2Q9P0K8 574 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.53□□□□□ -1.52
VMP1-205ENST00000587470 LIMCH1Q9UPQ0 1083 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 NEU2Q9Y3R4 380 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 ARHGEF5Q12774 1597 aa5.53□□□□□ -1.52
VMP1-205ENST00000587470 CLTCQ00610 1675 aaKnown RBP5.53□□□□□ -1.52
VMP1-205ENST00000587470 STRCP1A6NGW2 1772 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 DEPDC5O75140 1603 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 CCDC141Q6ZP82 1450 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 RRBP1Q9P2E9 1410 aaKnown RBP5.52□□□□□ -1.53
VMP1-205ENST00000587470 A0A1W2PS29 197 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 SHTN1A0MZ66 631 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 PEX1O43933 1283 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 RPLP2P05387 115 aaKnown RBP5.52□□□□□ -1.53
VMP1-205ENST00000587470 SBK3P0C264 359 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 C21orf58P58505 322 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 MTMR1Q13613 665 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 FAM50AQ14320 339 aaKnown RBP5.52□□□□□ -1.53
VMP1-205ENST00000587470 ZNF362Q5T0B9 420 aaPredicted RBP5.52□□□□□ -1.53
VMP1-205ENST00000587470 BOLLQ8N9W6 283 aaKnown RBP5.52□□□□□ -1.53
VMP1-205ENST00000587470 SSH3Q8TE77 659 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 COA7Q96BR5 231 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 PDLIM2Q96JY6 352 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 CLPTM1LQ96KA5 538 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 MRGPRX4Q96LA9 322 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 KIAA1586Q9HCI6 787 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 JKAMPQ9P055 326 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 CALCOCO1Q9P1Z2 691 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 ROBO1Q9Y6N7 1651 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 KDM5DQ9BY66 1539 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 DHX29Q7Z478 1369 aaKnown RBP5.52□□□□□ -1.53
VMP1-205ENST00000587470 PTPN23Q9H3S7 1636 aa5.52□□□□□ -1.53
VMP1-205ENST00000587470 DAPK1P53355 1430 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 IQGAP1P46940 1657 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 PRAMEF33A0A0G2JMD5 474 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 CCDC154A6NI56 674 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 PRAMEF10O60809 474 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 SLC43A1O75387 559 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 KCNA2P16389 499 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 EDNRBP24530 442 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 CACNA2D1P54289 1103 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 ZNF280AP59817 542 aaPredicted RBP5.51□□□□□ -1.53
VMP1-205ENST00000587470 FPGSQ05932 587 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 ZNF844Q08AG5 666 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 IL10RAQ13651 578 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 ABCB5Q2M3G0 1257 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 C3orf36Q3SXR2 165 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 GADL1Q6ZQY3 521 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 CLNKQ7Z7G1 428 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 ACTRT2Q8TDY3 377 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 TEKT5Q96M29 485 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 LRFN3Q9BTN0 628 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 TLR10Q9BXR5 811 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 PACSIN1Q9BY11 444 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 CCDC8Q9H0W5 538 aaPredicted RBP5.51□□□□□ -1.53
VMP1-205ENST00000587470 ADARB2Q9NS39 739 aaKnown RBP5.51□□□□□ -1.53
VMP1-205ENST00000587470 PCDHB1Q9Y5F3 818 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 ATP7AQ04656 1500 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 FAM135AQ9P2D6 1515 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 TNRQ92752 1358 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 A2MP01023 1474 aa5.51□□□□□ -1.53
VMP1-205ENST00000587470 INO80Q9ULG1 1556 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms