RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 TRPV4Q9HBA0 871 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 KBTBD4Q9NVX7 518 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 MRPS17Q9Y2R5 130 aaKnown RBP18.31■□□□□ 0.52
TRIM47-203ENST00000586495 SCN1AP35498 2009 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 A0A1W2PRU2 124 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 PSMC3P17980 439 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 GRM2Q14416 872 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 E2F4Q16254 413 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 MGAT5BQ3V5L5 792 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 FOXD4L5Q5VV16 416 aaPredicted RBP18.3■□□□□ 0.52
TRIM47-203ENST00000586495 WSCD1Q658N2 575 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 ZNF852Q6ZMS4 543 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 ASCL5Q7RTU5 278 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 DNAJB7Q7Z6W7 309 aaPredicted RBP18.3■□□□□ 0.52
TRIM47-203ENST00000586495 TMC8Q8IU68 726 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 DCP1BQ8IZD4 617 aaKnown RBP18.3■□□□□ 0.52
TRIM47-203ENST00000586495 GPD1LQ8N335 351 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 SHKBP1Q8TBC3 707 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 ZSCAN18Q8TBC5 510 aaPredicted RBP18.3■□□□□ 0.52
TRIM47-203ENST00000586495 SPPL2BQ8TCT7 592 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 KCNG4Q8TDN1 519 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 NOC3LQ8WTT2 800 aaKnown RBP18.3■□□□□ 0.52
TRIM47-203ENST00000586495 FOXD4L4Q8WXT5 416 aaPredicted RBP18.3■□□□□ 0.52
TRIM47-203ENST00000586495 DHX58Q96C10 678 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 BORCS6Q96GS4 357 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 ZSWIM3Q96MP5 696 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 CBWD1Q9BRT8 395 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 LRRC3Q9BY71 257 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 FGFBP2Q9BYJ0 223 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 TRIM9Q9C026 710 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 SEMA4AQ9H3S1 761 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 PCIF1Q9H4Z3 704 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 LTB4R2Q9NPC1 389 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 HEBP1Q9NRV9 189 aa18.3■□□□□ 0.52
TRIM47-203ENST00000586495 GOLGA8IPA6NC78 632 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 PRR23AA6NEV1 266 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 GOLGA8JA6NMD2 632 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 MAN2B1O00754 1011 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 NRG2O14511 850 aaPredicted RBP18.29■□□□□ 0.52
TRIM47-203ENST00000586495 ITGB3P05106 788 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 ZSCAN22P10073 491 aaPredicted RBP18.29■□□□□ 0.52
TRIM47-203ENST00000586495 GLULP15104 373 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 ASIC1P78348 528 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 SURF1Q15526 300 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 ATL3Q6DD88 541 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 VITQ6UXI7 678 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 MFSD6LQ8IWD5 586 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 TTC9BQ8N6N2 239 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 LRRC52Q8N7C0 313 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 C1orf127Q8N9H9 656 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 FAM200AQ8TCP9 573 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 SEPT5Q99719 369 aaPredicted RBP18.29■□□□□ 0.52
TRIM47-203ENST00000586495 MAGEF1Q9HAY2 307 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 TRPV5Q9NQA5 729 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 ITGA11Q9UKX5 1188 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 AGAP1Q9UPQ3 857 aa18.29■□□□□ 0.52
TRIM47-203ENST00000586495 R3HCC1Q9Y3T6 440 aaKnown RBP18.29■□□□□ 0.52
TRIM47-203ENST00000586495 ZNF263O14978 683 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 EIF3DO15371 548 aaKnown RBP eCLIP18.28■□□□□ 0.52
TRIM47-203ENST00000586495 LRRN2O75325 713 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 F13A1P00488 732 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 TMEM191BP0C7N4 346 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 CD72P21854 359 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 POLR2BP30876 1174 aaKnown RBP18.28■□□□□ 0.52
TRIM47-203ENST00000586495 GDI1P31150 447 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 VIPR2P41587 438 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 WNT7BP56706 349 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 TAF12Q16514 161 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 ARHGAP15Q53QZ3 475 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 CNNM4Q6P4Q7 775 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 ZC3H14Q6PJT7 736 aaKnown RBP18.28■□□□□ 0.52
TRIM47-203ENST00000586495 SHC4Q6S5L8 630 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 CSGALNACT2Q8N6G5 542 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 ZSWIM2Q8NEG5 633 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 ANKRD36BP1Q96IX9 119 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 ATXN3LQ9H3M9 355 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 PDE11AQ9HCR9 933 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 FAM13BQ9NYF5 915 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 CFAP45Q9UL16 551 aa18.28■□□□□ 0.52
TRIM47-203ENST00000586495 MTF2Q9Y483 593 aaPredicted RBP18.28■□□□□ 0.52
TRIM47-203ENST00000586495 ZNF233A6NK53 670 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 HEPACAM2A8MVW5 462 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 DPYSL4O14531 572 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 LAMTOR5O43504 91 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 HUS1O60921 280 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 SOAT2O75908 522 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 KRT19P08727 400 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 GABRR2P28476 465 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 RBP5P82980 135 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 TSPY1Q01534 308 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 LRRTM3Q86VH5 581 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 YAF2Q8IY57 180 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 TMEM86AQ8N2M4 240 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 GCNAQ96QF7 691 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 C7orf25Q9BPX7 421 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 KIAA1586Q9HCI6 787 aa18.27■□□□□ 0.52
TRIM47-203ENST00000586495 ZNF334Q9HCZ1 680 aaPredicted RBP18.27■□□□□ 0.52
TRIM47-203ENST00000586495 SPATA6Q9NWH7 488 aaPredicted RBP18.27■□□□□ 0.52
TRIM47-203ENST00000586495 TCHHQ07283 1943 aa18.27■□□□□ 0.51
TRIM47-203ENST00000586495 MIA3Q5JRA6 1907 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms