RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 STKLD1Q8NE28 680 aa12.61□□□□□ -0.39
LIG3-207ENST00000586119 BORCS6Q96GS4 357 aa12.61□□□□□ -0.39
LIG3-207ENST00000586119 FAM126AQ9BYI3 521 aaPredicted RBP12.61□□□□□ -0.39
LIG3-207ENST00000586119 GPR88Q9GZN0 384 aa12.61□□□□□ -0.39
LIG3-207ENST00000586119 ZHX3Q9H4I2 956 aa12.61□□□□□ -0.39
LIG3-207ENST00000586119 IL21Q9HBE4 155 aa12.61□□□□□ -0.39
LIG3-207ENST00000586119 LARSQ9P2J5 1176 aaKnown RBP12.61□□□□□ -0.39
LIG3-207ENST00000586119 CPSF3Q9UKF6 684 aaKnown RBP12.61□□□□□ -0.39
LIG3-207ENST00000586119 MYBPHLA2RUH7 354 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 K7ENM7 598 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 HNRNPDLO14979 420 aaKnown RBP12.6□□□□□ -0.39
LIG3-207ENST00000586119 GDF9O60383 454 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 PIGRP01833 764 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 ATF6P18850 670 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 TYMPP19971 482 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 GJB2P29033 226 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 CTHP32929 405 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 FCHO2Q0JRZ9 810 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 SIM2Q14190 667 aaPredicted RBP12.6□□□□□ -0.39
LIG3-207ENST00000586119 MYBPC2Q14324 1141 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 KARSQ15046 597 aaKnown RBP12.6□□□□□ -0.39
LIG3-207ENST00000586119 SLC39A12Q504Y0 691 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 SPEM1Q8N4L4 309 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 CELF5Q8N6W0 485 aaKnown RBP12.6□□□□□ -0.39
LIG3-207ENST00000586119 ZSWIM2Q8NEG5 633 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 SECISBP2LQ93073 1101 aaKnown RBP12.6□□□□□ -0.39
LIG3-207ENST00000586119 PSMG2Q969U7 264 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 CDK5RAP3Q96JB5 506 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 FAM84AQ96KN4 292 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 SEPT5Q99719 369 aaPredicted RBP12.6□□□□□ -0.39
LIG3-207ENST00000586119 MSTO1Q9BUK6 570 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 SLC46A2Q9BY10 475 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 TMLHEQ9NVH6 421 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 KCNG1Q9UIX4 513 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 GMEB2Q9UKD1 530 aa12.6□□□□□ -0.39
LIG3-207ENST00000586119 CDV3Q9UKY7 258 aaKnown RBP12.6□□□□□ -0.39
LIG3-207ENST00000586119 CACNA1BQ00975 2339 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 ANO9A1A5B4 782 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 TRAK2O60296 914 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 FAM13AO94988 1023 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 PLCG1P19174 1290 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 PXNP49023 591 aaPredicted RBP12.59□□□□□ -0.39
LIG3-207ENST00000586119 GPR15P49685 360 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 ZNF131P52739 623 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 NRLP54845 237 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 WNT7BP56706 349 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 LMNB2Q03252 620 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 CCDC6Q16204 474 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 MGAT5BQ3V5L5 792 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 SDHAF4Q5VUM1 108 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 WSCD1Q658N2 575 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 ARMCX5Q6P1M9 558 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 USP49Q70CQ1 688 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 GPR161Q8N6U8 529 aaKnown RBP12.59□□□□□ -0.39
LIG3-207ENST00000586119 RIN3Q8TB24 985 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 FAM200AQ8TCP9 573 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 TMX3Q96JJ7 454 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 ZCWPW1Q9H0M4 648 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 KCND2Q9NZV8 630 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 EML5Q05BV3 1969 aa12.59□□□□□ -0.39
LIG3-207ENST00000586119 SPAG17Q6Q759 2223 aa12.58□□□□□ -0.39
LIG3-207ENST00000586119 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.58□□□□□ -0.4
LIG3-207ENST00000586119 OTOL1A6NHN0 477 aaPredicted RBP12.58□□□□□ -0.4
LIG3-207ENST00000586119 PRR5-ARHGAP8B1AHC4 643 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 TULP1O00294 542 aaPredicted RBP12.58□□□□□ -0.4
LIG3-207ENST00000586119 DPYSL4O14531 572 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 CYB561D2O14569 222 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 EXTL3O43909 919 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 OBSL1O75147 1896 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 ODC1P11926 461 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 ARHGAP8P85298 464 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 GTF2BQ00403 316 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 PLD1Q13393 1074 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 TMEM132DQ14C87 1099 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 ARL6IP4Q66PJ3 421 aaKnown RBP12.58□□□□□ -0.4
LIG3-207ENST00000586119 NAIF1Q69YI7 327 aaPredicted RBP12.58□□□□□ -0.4
LIG3-207ENST00000586119 TRIM68Q6AZZ1 485 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 LAIR1Q6GTX8 287 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 CRELD2Q6UXH1 353 aaPredicted RBP12.58□□□□□ -0.4
LIG3-207ENST00000586119 TMEM150AQ86TG1 271 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 EFCAB13Q8IY85 973 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 BPIFB1Q8TDL5 484 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 RAD54LQ92698 747 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 KCNN1Q92952 543 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 E2F7Q96AV8 911 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 CHFRQ96EP1 664 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 PYM1Q9BRP8 204 aaKnown RBP12.58□□□□□ -0.4
LIG3-207ENST00000586119 OXCT2Q9BYC2 517 aaPredicted RBP12.58□□□□□ -0.4
LIG3-207ENST00000586119 TASP1Q9H6P5 420 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 C8orf33Q9H7E9 229 aaPredicted RBP12.58□□□□□ -0.4
LIG3-207ENST00000586119 PARVGQ9HBI0 331 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 FBRSL1Q9HCM7 1045 aaKnown RBP12.58□□□□□ -0.4
LIG3-207ENST00000586119 GKN1Q9NS71 199 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 SEMA4GQ9NTN9 838 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 RAB23Q9ULC3 237 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 ODF2LQ9ULJ1 636 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 CCL26Q9Y258 94 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 ASB3Q9Y575 518 aa12.58□□□□□ -0.4
LIG3-207ENST00000586119 H0YCG3 227 aa12.57□□□□□ -0.4
LIG3-207ENST00000586119 H3BQV1 296 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms