RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 SPATA18Q8TC71 538 aa9.3□□□□□ -0.92
ATG4D-202ENST00000585437 PLEKHO2Q8TD55 490 aa9.3□□□□□ -0.92
ATG4D-202ENST00000585437 ACSF2Q96CM8 615 aaPredicted RBP9.3□□□□□ -0.92
ATG4D-202ENST00000585437 TIGD1Q96MW7 591 aa9.3□□□□□ -0.92
ATG4D-202ENST00000585437 MYADMQ96S97 322 aa9.3□□□□□ -0.92
ATG4D-202ENST00000585437 CGRRF1Q99675 332 aa9.3□□□□□ -0.92
ATG4D-202ENST00000585437 LRFN3Q9BTN0 628 aa9.3□□□□□ -0.92
ATG4D-202ENST00000585437 CRISPLD1Q9H336 500 aa9.3□□□□□ -0.92
ATG4D-202ENST00000585437 HSFX1Q9UBD0 423 aa9.3□□□□□ -0.92
ATG4D-202ENST00000585437 L1RE1Q9UN81 338 aa9.3□□□□□ -0.92
ATG4D-202ENST00000585437 SORCS3Q9UPU3 1222 aa9.3□□□□□ -0.92
ATG4D-202ENST00000585437 MYO16Q9Y6X6 1858 aa9.3□□□□□ -0.92
ATG4D-202ENST00000585437 MTMR11A4FU01 709 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 CYB561D2O14569 222 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 MAPK13O15264 365 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 CCL16O15467 120 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 XYLBO75191 536 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 STAU1O95793 577 aaKnown RBP9.29□□□□□ -0.92
ATG4D-202ENST00000585437 OR4Q2P0C623 313 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 EPHA5P54756 1037 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 MCCD1P59942 119 aaPredicted RBP9.29□□□□□ -0.92
ATG4D-202ENST00000585437 NTHL1P78549 312 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 SIGLEC14Q08ET2 396 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 PNOCQ13519 176 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 MTMR3Q13615 1198 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 STX1AQ16623 288 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 TMEM31Q5JXX7 168 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 PRSS36Q5K4E3 855 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 LMBRD2Q68DH5 695 aaPredicted RBP9.29□□□□□ -0.92
ATG4D-202ENST00000585437 BMP8AQ7Z5Y6 402 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 USP37Q86T82 979 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 ELOA2Q8IYF1 753 aaPredicted RBP9.29□□□□□ -0.92
ATG4D-202ENST00000585437 TMEM86AQ8N2M4 240 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 ASIC4Q96FT7 647 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 CCDC34Q96HJ3 373 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 ANKRD36BP1Q96IX9 119 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 TMEM209Q96SK2 561 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 PKMYT1Q99640 499 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 ZCWPW1Q9H0M4 648 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 PIDD1Q9HB75 910 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 HCFC1R1Q9NWW0 138 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.29□□□□□ -0.92
ATG4D-202ENST00000585437 DNMT3BQ9UBC3 853 aaKnown RBP9.29□□□□□ -0.92
ATG4D-202ENST00000585437 AGAP1Q9UPQ3 857 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 YIPF1Q9Y548 306 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 ZFP37Q9Y6Q3 630 aaPredicted RBP9.29□□□□□ -0.92
ATG4D-202ENST00000585437 COL4A3Q01955 1670 aa9.29□□□□□ -0.92
ATG4D-202ENST00000585437 MYH10P35580 1976 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 FAM86C2PA6NEL3 165 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 ANHXE9PGG2 379 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 PRRG1O14668 218 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 GABRDO14764 452 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 EXOC3O60645 756 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 MICAL2O94851 1124 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 KIF20AO95235 890 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 TNNC2P02585 160 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 LRG1P02750 347 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 NR3C1P04150 777 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 ASGR2P07307 311 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 LAMP2P13473 410 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 ARPP19P56211 112 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 RBP5P82980 135 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 ENPEPQ07075 957 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 ADCY1Q08828 1119 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 HTR4Q13639 388 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 CAMK4Q16566 473 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 DUOXA2Q1HG44 320 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 SLC5A9Q2M3M2 681 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 PABPC1LQ4VXU2 614 aaKnown RBP9.28□□□□□ -0.92
ATG4D-202ENST00000585437 WSCD1Q658N2 575 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 CENPPQ6IPU0 288 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 TRIM67Q6ZTA4 783 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 GET4Q7L5D6 327 aaPredicted RBP9.28□□□□□ -0.92
ATG4D-202ENST00000585437 DPH6Q7L8W6 267 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 TRAPPC11Q7Z392 1133 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 NPAS3Q8IXF0 933 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 UBALD2Q8IYN6 164 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 PDCL2Q8N4E4 241 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 CSGALNACT2Q8N6G5 542 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 TOP6BLQ8N6T0 577 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 RDH13Q8NBN7 331 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 PARD3BQ8TEW8 1205 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 NOC3LQ8WTT2 800 aaKnown RBP9.28□□□□□ -0.92
ATG4D-202ENST00000585437 C2orf15Q8WU43 125 aaKnown RBP9.28□□□□□ -0.92
ATG4D-202ENST00000585437 KBTBD7Q8WVZ9 684 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 ZNF516Q92618 1163 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 CCDC47Q96A33 483 aaKnown RBP9.28□□□□□ -0.92
ATG4D-202ENST00000585437 GSDMAQ96QA5 445 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 NAT10Q9H0A0 1025 aaKnown RBP9.28□□□□□ -0.92
ATG4D-202ENST00000585437 XYLT2Q9H1B5 865 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 DNAJC25Q9H1X3 360 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 VRTNQ9H8Y1 702 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 KCNK12Q9HB15 430 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 CYP4F11Q9HBI6 524 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 ANO10Q9NW15 660 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 CEP72Q9P209 647 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 IGSF9Q9P2J2 1179 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 LIMD1Q9UGP4 676 aa9.28□□□□□ -0.92
ATG4D-202ENST00000585437 HOOK1Q9UJC3 728 aaKnown RBP9.28□□□□□ -0.92
ATG4D-202ENST00000585437 CDH7Q9ULB5 785 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms