RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 MYL4P12829 197 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 CEBPBP17676 345 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 HOXD13P35453 343 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 CYP2J2P51589 502 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 PFKPQ01813 784 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 EHHADHQ08426 723 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 TAF12Q16514 161 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 SNRNP35Q16560 246 aaKnown RBP13.33□□□□□ -0.28
SS18-225ENST00000585121 KNOP1Q1ED39 458 aaKnown RBP13.33□□□□□ -0.28
SS18-225ENST00000585121 SLC5A9Q2M3M2 681 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 IER5LQ5T953 404 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 CBWD2Q8IUF1 395 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 GRAMD1CQ8IYS0 662 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 TMEM86AQ8N2M4 240 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 XXYLT1Q8NBI6 393 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 RDH13Q8NBN7 331 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 ST13P5Q8NFI4 369 aaPredicted RBP13.33□□□□□ -0.28
SS18-225ENST00000585121 FAM200AQ8TCP9 573 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 GPR152Q8TDT2 470 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 C2orf15Q8WU43 125 aaKnown RBP13.33□□□□□ -0.28
SS18-225ENST00000585121 CCDC34Q96HJ3 373 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 SHDQ96IW2 340 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 MTMR12Q9C0I1 747 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 GPR88Q9GZN0 384 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 SLC2A4RGQ9NR83 387 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 INTS13Q9NVM9 706 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 CEP72Q9P209 647 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 CA14Q9ULX7 337 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 SLC27A5Q9Y2P5 690 aa13.33□□□□□ -0.28
SS18-225ENST00000585121 ZNF318Q5VUA4 2279 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 TGFB1I1O43294 461 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 ECI2O75521 394 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 FGF19O95750 216 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 TNNI1P19237 187 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 WNT7BP56706 349 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 MYL7Q01449 175 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 VEPH1Q14D04 833 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 BMT2Q1RMZ1 405 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 MGAT5BQ3V5L5 792 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 PRSS36Q5K4E3 855 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 LMBRD2Q68DH5 695 aaPredicted RBP13.32□□□□□ -0.28
SS18-225ENST00000585121 WDR49Q8IV35 697 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 HS6ST3Q8IZP7 471 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 OR10T2Q8NGX3 314 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 SPPL2BQ8TCT7 592 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 TCEAL4Q96EI5 215 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 BORCS6Q96GS4 357 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 TMEM209Q96SK2 561 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 SEPT5Q99719 369 aaPredicted RBP13.32□□□□□ -0.28
SS18-225ENST00000585121 KXD1Q9BQD3 176 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 SLITRK6Q9H5Y7 841 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 SNX9Q9Y5X1 595 aa13.32□□□□□ -0.28
SS18-225ENST00000585121 DOCK8Q8NF50 2099 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 EXOC3O60645 756 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 KIF20AO95235 890 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 DLATP10515 647 aaKnown RBP13.31□□□□□ -0.28
SS18-225ENST00000585121 LHX1P48742 406 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 EPHA5P54756 1037 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 GPC5P78333 572 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 NHLH1Q02575 133 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 NFE2Q16621 373 aaPredicted RBP13.31□□□□□ -0.28
SS18-225ENST00000585121 PDCL2Q8N4E4 241 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 TOP6BLQ8N6T0 577 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 FSIP1Q8NA03 581 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 PRSS33Q8NF86 280 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 SPATA18Q8TC71 538 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 RPP25Q9BUL9 199 aaKnown RBP13.31□□□□□ -0.28
SS18-225ENST00000585121 ZFP14Q9HCL3 533 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 ARHGEF3Q9NR81 526 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 GDAP2Q9NXN4 497 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 HPSEQ9Y251 543 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 PCDHB5Q9Y5E4 795 aa13.31□□□□□ -0.28
SS18-225ENST00000585121 A0A1W2PQ27 194 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 A0A1W2PQ64 194 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 A0A1W2PQD8 194 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 GOLGA6L4A6NEF3 574 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 GALR2O43603 387 aaPredicted RBP13.3□□□□□ -0.28
SS18-225ENST00000585121 VNN2O95498 520 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 AOC1P19801 751 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 PCSK1P29120 753 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 CCR2P41597 374 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 NDUFA8P51970 172 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 NUCB2P80303 420 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 CYP24A1Q07973 514 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 PSMD6Q15008 389 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 KMT5BQ4FZB7 885 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 DPH6Q7L8W6 267 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 DNAJB7Q7Z6W7 309 aaPredicted RBP13.3□□□□□ -0.28
SS18-225ENST00000585121 C12orf56Q8IXR9 622 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 TMEM105Q8N8V8 129 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 SMARCD2Q92925 531 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 PSMG2Q969U7 264 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 ELSPBP1Q96BH3 223 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 HPDLQ96IR7 371 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 IPO9Q96P70 1041 aaKnown RBP13.3□□□□□ -0.28
SS18-225ENST00000585121 GCNAQ96QF7 691 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 ACBD6Q9BR61 282 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 CRISPLD1Q9H336 500 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 TBC1D17Q9HA65 648 aa13.3□□□□□ -0.28
SS18-225ENST00000585121 DDX43Q9NXZ2 648 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms