RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SLC39A4Q6P5W5 647 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 METTL23Q86XA0 190 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 NT5DC4Q86YG4 428 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 ARID3BQ8IVW6 561 aaPredicted RBP16.25■□□□□ 0.19
VAPA-209ENST00000585042 THEM5Q8N1Q8 247 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 KRI1Q8N9T8 703 aaKnown RBP16.25■□□□□ 0.19
VAPA-209ENST00000585042 ATAD1Q8NBU5 361 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 HVCN1Q96D96 273 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 FAM212AQ96EL1 285 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 CRISPLD1Q9H336 500 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 SMG5Q9UPR3 1016 aaKnown RBP16.25■□□□□ 0.19
VAPA-209ENST00000585042 SLC27A5Q9Y2P5 690 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 COL4A2P08572 1712 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 DPYSL4O14531 572 aa16.24■□□□□ 0.19
VAPA-209ENST00000585042 PAPSS2O95340 614 aaPredicted RBP16.24■□□□□ 0.19
VAPA-209ENST00000585042 CCNE1P24864 410 aa16.24■□□□□ 0.19
VAPA-209ENST00000585042 CXCL12P48061 93 aa16.24■□□□□ 0.19
VAPA-209ENST00000585042 GUCY2FP51841 1108 aa16.24■□□□□ 0.19
VAPA-209ENST00000585042 PLCB2Q00722 1185 aa16.24■□□□□ 0.19
VAPA-209ENST00000585042 LRRC32Q14392 662 aa16.24■□□□□ 0.19
VAPA-209ENST00000585042 KARSQ15046 597 aaKnown RBP16.24■□□□□ 0.19
VAPA-209ENST00000585042 DGKKQ5KSL6 1271 aa16.24■□□□□ 0.19
VAPA-209ENST00000585042 ADALQ6DHV7 355 aa16.24■□□□□ 0.19
VAPA-209ENST00000585042 GAREM2Q75VX8 874 aa16.24■□□□□ 0.19
VAPA-209ENST00000585042 ZNF720Q7Z2F6 126 aa16.24■□□□□ 0.19
VAPA-209ENST00000585042 RALGPS2Q86X27 583 aaPredicted RBP16.24■□□□□ 0.19
VAPA-209ENST00000585042 SPEM1Q8N4L4 309 aa16.24■□□□□ 0.19
VAPA-209ENST00000585042 RASSF8Q8NHQ8 419 aa16.24■□□□□ 0.19
VAPA-209ENST00000585042 LRRC15Q8TF66 581 aa16.24■□□□□ 0.19
VAPA-209ENST00000585042 ZCWPW1Q9H0M4 648 aa16.24■□□□□ 0.19
VAPA-209ENST00000585042 SEL1LQ9UBV2 794 aa16.24■□□□□ 0.19
VAPA-209ENST00000585042 AGO2Q9UKV8 859 aaKnown RBP16.24■□□□□ 0.19
VAPA-209ENST00000585042 MYBPHLA2RUH7 354 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 SOBPA7XYQ1 873 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 ANKRD63C9JTQ0 380 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 PPEF2O14830 753 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 CDC25CP30307 473 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 NMT1P30419 496 aaKnown RBP16.23■□□□□ 0.19
VAPA-209ENST00000585042 CNR2P34972 360 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 ACOT2P49753 483 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 TAF6P49848 677 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 KPNA1P52294 538 aaPredicted RBP16.23■□□□□ 0.19
VAPA-209ENST00000585042 VEPH1Q14D04 833 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 SF3A1Q15459 793 aaKnown RBP16.23■□□□□ 0.19
VAPA-209ENST00000585042 TSSK4Q6SA08 328 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 TMEM130Q8N3G9 435 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 SYNPOQ8N3V7 929 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 SPPL2BQ8TCT7 592 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 MKNK1Q9BUB5 465 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 ATXN3LQ9H3M9 355 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 ZHX3Q9H4I2 956 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 TASP1Q9H6P5 420 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 DPP3Q9NY33 737 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 STK17AQ9UEE5 414 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 RAB23Q9ULC3 237 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 GPR179Q6PRD1 2367 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 TICRRQ7Z2Z1 1910 aa16.23■□□□□ 0.19
VAPA-209ENST00000585042 CEP250Q9BV73 2442 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 CYB561D2O14569 222 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 LRP3O75074 770 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 IL18RAPO95256 599 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 CD2BP2O95400 341 aaKnown RBP16.22■□□□□ 0.19
VAPA-209ENST00000585042 NFICP08651 508 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 PDCP20941 246 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 GABRR2P28476 465 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 HOXA6P31267 233 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 LMNB2Q03252 620 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 PTPAQ15257 358 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 RSPO4Q2I0M5 234 aaPredicted RBP16.22■□□□□ 0.19
VAPA-209ENST00000585042 DCP1BQ8IZD4 617 aaKnown RBP16.22■□□□□ 0.19
VAPA-209ENST00000585042 OR10T2Q8NGX3 314 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 RSPRY1Q96DX4 576 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 TMEM209Q96SK2 561 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 STRA6Q9BX79 667 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 THG1LQ9NWX6 298 aaKnown RBP16.22■□□□□ 0.19
VAPA-209ENST00000585042 CCDC39Q9UFE4 941 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 GMEB2Q9UKD1 530 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 EXOC7Q9UPT5 735 aa16.22■□□□□ 0.19
VAPA-209ENST00000585042 NCANO14594 1321 aa16.21■□□□□ 0.19
VAPA-209ENST00000585042 KPNA7A9QM74 516 aa16.21■□□□□ 0.19
VAPA-209ENST00000585042 PNPLA4P41247 253 aa16.21■□□□□ 0.19
VAPA-209ENST00000585042 GRIN1Q05586 938 aa16.21■□□□□ 0.19
VAPA-209ENST00000585042 SV2CQ496J9 727 aa16.21■□□□□ 0.19
VAPA-209ENST00000585042 SLC39A12Q504Y0 691 aa16.21■□□□□ 0.19
VAPA-209ENST00000585042 ZC2HC1CQ53FD0 456 aaPredicted RBP16.21■□□□□ 0.19
VAPA-209ENST00000585042 GPR158Q5T848 1215 aa16.21■□□□□ 0.19
VAPA-209ENST00000585042 LAIR1Q6GTX8 287 aa16.21■□□□□ 0.19
VAPA-209ENST00000585042 BPIFB1Q8TDL5 484 aa16.21■□□□□ 0.19
VAPA-209ENST00000585042 GCNAQ96QF7 691 aa16.21■□□□□ 0.19
VAPA-209ENST00000585042 SPECC1L-ADORA2AF8WAN1 911 aa16.2■□□□□ 0.18
VAPA-209ENST00000585042 PPP1R37O75864 691 aa16.2■□□□□ 0.18
VAPA-209ENST00000585042 LDHAP00338 332 aaKnown RBP16.2■□□□□ 0.18
VAPA-209ENST00000585042 HAPLN1P10915 354 aaPredicted RBP16.2■□□□□ 0.18
VAPA-209ENST00000585042 GAP43P17677 238 aa16.2■□□□□ 0.18
VAPA-209ENST00000585042 TGM1P22735 817 aa16.2■□□□□ 0.18
VAPA-209ENST00000585042 DDX6P26196 483 aaKnown RBP eCLIP16.2■□□□□ 0.18
VAPA-209ENST00000585042 CTHP32929 405 aa16.2■□□□□ 0.18
VAPA-209ENST00000585042 TAF12Q16514 161 aa16.2■□□□□ 0.18
VAPA-209ENST00000585042 MGAT5BQ3V5L5 792 aa16.2■□□□□ 0.18
VAPA-209ENST00000585042 STXBP5Q5T5C0 1151 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms