RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 TAS1R2Q8TE23 839 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 SEMA4DQ92854 862 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 RNPC3Q96LT9 517 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 RUNDC3BQ96NL0 473 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 FAM129AQ9BZQ8 928 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 DDX47Q9H0S4 455 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 COQ4Q9Y3A0 265 aa15.97■□□□□ 0.15
CDK5RAP3-236ENST00000584991 DDX3YO15523 660 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 MTA2O94776 668 aa15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 C4BPAP04003 597 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 RPLP2P05387 115 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CLTAP09496 248 aa15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CXCL8P10145 99 aa15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 AXLP30530 894 aa15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CDR1P51861 262 aa15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 MGAT3Q09327 533 aa15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 PHLDB3Q6NSJ2 640 aa15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 SLC27A1Q6PCB7 646 aa15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 C15orf39Q6ZRI6 1047 aa15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CTU1Q7Z7A3 348 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 FAM228AQ86W67 206 aa15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 SLC43A3Q8NBI5 491 aa15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 FBXL13Q8NEE6 735 aa15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 OR5B17Q8NGF7 314 aa15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 DHX38Q92620 1227 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 AGPAT1Q99943 283 aa15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 SENP6Q9GZR1 1112 aaPredicted RBP15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.96■□□□□ 0.152e-6■■■■□ 19.4
CDK5RAP3-236ENST00000584991 PIN4Q9Y237 131 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 CITO14578 2027 aa15.96■□□□□ 0.15
CDK5RAP3-236ENST00000584991 DNM1LO00429 736 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 FAM107AO95990 144 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 SURF1Q15526 300 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 DCAF4L1Q3SXM0 396 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 ZACNQ401N2 412 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 TDRD10Q5VZ19 366 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 KCTD16Q68DU8 428 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 UBL4BQ8N7F7 174 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 AP1M1Q9BXS5 423 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 EIF2AQ9BY44 585 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 TRPV6Q9H1D0 765 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 RAB20Q9NX57 234 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 AMACRQ9UHK6 382 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 RASAL2Q9UJF2 1139 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 ARVCFO00192 962 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 PODXLO00592 558 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 B4GALT4O60513 344 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 PPFIA2O75334 1257 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 FGGP02679 453 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 PDCLQ13371 301 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 TRADDQ15628 312 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 KYAT1Q16773 422 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 TMC3Q7Z5M5 1100 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 APBB1IPQ7Z5R6 666 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 WDR49Q8IV35 697 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 ARHGEF19Q8IW93 802 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 ACAP3Q96P50 834 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 PARP2Q9UGN5 583 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 OGDHLQ9ULD0 1010 aa15.95■□□□□ 0.14
CDK5RAP3-236ENST00000584991 TRIP11Q15643 1979 aa15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 LACTBL1A8MY62 500 aa15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 MEFVO15553 781 aaPredicted RBP15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 RTN2O75298 545 aa15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 IL18RAPO95256 599 aa15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 PAEPP09466 180 aa15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 GRM5P41594 1212 aa15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 ZNF844Q08AG5 666 aa15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 UAP1Q16222 522 aaPredicted RBP15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 TRIM71Q2Q1W2 868 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 SH2D3CQ8N5H7 860 aa15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 ELMO3Q96BJ8 720 aa15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 ERP44Q9BS26 406 aa15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 CNOT10Q9H9A5 744 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 UBE2TQ9NPD8 197 aaPredicted RBP15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 ST3GAL5Q9UNP4 418 aa15.94■□□□□ 0.14
CDK5RAP3-236ENST00000584991 MROH7Q68CQ1 1323 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 DAPK3O43293 454 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 KIAA0754O94854 1291 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 VNN1O95497 513 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 HLA-DRAP01903 254 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 CHRNA3P32297 505 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 LBX1P52954 281 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 AP3M2P53677 418 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 GPC5P78333 572 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 NFX1Q12986 1120 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 SLC10A6Q3KNW5 377 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 DUPD1Q68J44 220 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 FBXO46Q6PJ61 603 aaPredicted RBP15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 FMO2Q99518 471 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 PI4K2AQ9BTU6 479 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 TXLNGYQ9BZA5 131 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 OSBPL7Q9BZF2 842 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 TRIM6Q9C030 488 aaPredicted RBP15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 MTMR12Q9C0I1 747 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 WNT8AQ9H1J5 351 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 GOLPH3Q9H4A6 298 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 OSGEPQ9NPF4 335 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 SNTG2Q9NY99 539 aa15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 FOXN3O00409 490 aaPredicted RBP15.93■□□□□ 0.14
CDK5RAP3-236ENST00000584991 TTI1O43156 1089 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms