RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 MCCD1P59942 119 aaPredicted RBP5.85□□□□□ -1.47
VAPA-207ENST00000583879 ROR1Q01973 937 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 MRPL58Q14197 206 aaKnown RBP5.85□□□□□ -1.47
VAPA-207ENST00000583879 DCAF4L1Q3SXM0 396 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 XKR4Q5GH76 650 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 GLRA4Q5JXX5 417 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 CYP4A22Q5TCH4 519 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 EEF1DP3Q658K8 133 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 IQCEQ6IPM2 695 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 VITQ6UXI7 678 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 ALKAL1Q6UXT8 129 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 PRR23CQ6ZRP0 262 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 PRR23BQ6ZRT6 265 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 PDZD4Q76G19 769 aaPredicted RBP5.85□□□□□ -1.47
VAPA-207ENST00000583879 CATSPER3Q86XQ3 398 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 MFSD6LQ8IWD5 586 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 TCEAL8Q8IYN2 117 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 SPEM1Q8N4L4 309 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 C3orf58Q8NDZ4 430 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 DEPTORQ8TB45 409 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 DEPDC1BQ8WUY9 529 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 DDX1Q92499 740 aaKnown RBP5.85□□□□□ -1.47
VAPA-207ENST00000583879 SMARCD2Q92925 531 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 TNFRSF25Q93038 417 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 TCEAL4Q96EI5 215 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 ZNF512Q96ME7 567 aaPredicted RBP5.85□□□□□ -1.47
VAPA-207ENST00000583879 MTMR9Q96QG7 549 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 NACC1Q96RE7 527 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 GPR88Q9GZN0 384 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 CCDC113Q9H0I3 377 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 TRPV4Q9HBA0 871 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 CYP4F11Q9HBI6 524 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 GOLGA2P5Q9HBQ8 144 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 TUFT1Q9NNX1 390 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 CYLDQ9NQC7 956 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 PDRG1Q9NUG6 133 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 GDAQ9Y2T3 454 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 DYRK1BQ9Y463 629 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.85□□□□□ -1.47
VAPA-207ENST00000583879 PIAS3Q9Y6X2 628 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 COL4A3Q01955 1670 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 ZFHX4Q86UP3 3567 aa5.85□□□□□ -1.47
VAPA-207ENST00000583879 STK36Q9NRP7 1315 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 ESPNB1AK53 854 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 BTBD18B2RXH4 712 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 CHURC1-FNTBB4DL54 471 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 H7C4K7 107 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 K7ERI5 159 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 K7ESF4 209 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 MEN1O00255 615 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 ARNTLO00327 626 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 TM4SF5O14894 197 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 SYN3O14994 580 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 OIP5O43482 229 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 PFKFB2O60825 505 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 DTNBO60941 627 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 MOSPD3O75425 235 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 MED24O75448 989 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 PAPSS2O95340 614 aaPredicted RBP5.84□□□□□ -1.47
VAPA-207ENST00000583879 CTDNEP1O95476 244 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 EDN1P05305 212 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 GJA1P17302 382 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 RPA1P27694 616 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 HOXA6P31267 233 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 RPL9P32969 192 aaKnown RBP5.84□□□□□ -1.47
VAPA-207ENST00000583879 KRT2P35908 639 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 VIPR2P41587 438 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 FNTBP49356 437 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 EFNA5P52803 228 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 ARPP19P56211 112 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 SATB1Q01826 763 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 DMWDQ09019 674 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 SRSF5Q13243 272 aaKnown RBP5.84□□□□□ -1.47
VAPA-207ENST00000583879 PPP2R5AQ15172 486 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 NT5DC1Q5TFE4 455 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 ATF7IP2Q5U623 682 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 TPGS2Q68CL5 300 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 C1orf228Q6PIY5 440 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 APBB1IPQ7Z5R6 666 aaPredicted RBP5.84□□□□□ -1.47
VAPA-207ENST00000583879 LONP2Q86WA8 852 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 ELMOD1Q8N336 334 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 LEMD2Q8NC56 503 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 ZSCAN18Q8TBC5 510 aaPredicted RBP5.84□□□□□ -1.47
VAPA-207ENST00000583879 CSGALNACT1Q8TDX6 532 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 BSNDQ8WZ55 320 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 WASF1Q92558 559 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 E2F7Q96AV8 911 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 MSANTD3Q96H12 275 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 POLR3CQ9BUI4 534 aaPredicted RBP5.84□□□□□ -1.47
VAPA-207ENST00000583879 POLD4Q9HCU8 107 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 BRMS1Q9HCU9 246 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 SLC38A7Q9NVC3 462 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 CEP72Q9P209 647 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 ORC3Q9UBD5 711 aaPredicted RBP5.84□□□□□ -1.47
VAPA-207ENST00000583879 AFF4Q9UHB7 1163 aaKnown RBP5.84□□□□□ -1.47
VAPA-207ENST00000583879 FBXL5Q9UKA1 691 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 TPCN1Q9ULQ1 816 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 MAFFQ9ULX9 164 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 TNFSF13BQ9Y275 285 aa5.84□□□□□ -1.47
VAPA-207ENST00000583879 INSL5Q9Y5Q6 135 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms