RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 PHF2O75151 1096 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 TBX18O95935 607 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 COPB2P35606 906 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 TERF1P54274 439 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 IL13RA1P78552 427 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 ATP8B2P98198 1209 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 SKIDA1Q1XH10 827 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 PRR31Q5SQ13 230 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 KANK2Q63ZY3 851 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 MCTP2Q6DN12 878 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 ITPRIPL1Q6GPH6 555 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 HERC6Q8IVU3 1022 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 PCSK9Q8NBP7 692 aaKnown RBP5.61□□□□□ -1.51
SS18-223ENST00000583595 PIK3C3Q8NEB9 887 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 REPS2Q8NFH8 660 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 OR5AN1Q8NGI8 311 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 OR1N1Q8NGS0 311 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 CYP2W1Q8TAV3 490 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 OTUD7AQ8TE49 926 aaPredicted RBP5.61□□□□□ -1.51
SS18-223ENST00000583595 PAWRQ96IZ0 340 aaKnown RBP5.61□□□□□ -1.51
SS18-223ENST00000583595 UHRF1Q96T88 793 aaPredicted RBP5.61□□□□□ -1.51
SS18-223ENST00000583595 CHCHD6Q9BRQ6 235 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 TACO1Q9BSH4 297 aaKnown RBP5.61□□□□□ -1.51
SS18-223ENST00000583595 DPH1Q9BZG8 443 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 HAPLN2Q9GZV7 340 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 KCND1Q9NSA2 647 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 IRAK4Q9NWZ3 460 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 SLC13A4Q9UKG4 626 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 TMEM98Q9Y2Y6 226 aa5.61□□□□□ -1.51
SS18-223ENST00000583595 PRSS29PA6NIE9 313 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 H0Y858 1186 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 HOXC11O43248 304 aaPredicted RBP5.6□□□□□ -1.51
SS18-223ENST00000583595 ADCY6O43306 1168 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 ABHD16AO95870 558 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 SBK3P0C264 359 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 GYS1P13807 737 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 JUPP14923 745 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 FPR1P21462 350 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 GABRB3P28472 473 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 PCSK1P29120 753 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 DLGAP5Q15398 846 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 STILQ15468 1287 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 LCE5AQ5TCM9 118 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 ANKRD45Q5TZF3 282 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 VASNQ6EMK4 673 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 TANGO2Q6ICL3 276 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 ZNF783Q6ZMS7 281 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 BCL6BQ8N143 479 aaPredicted RBP5.6□□□□□ -1.51
SS18-223ENST00000583595 VGLL2Q8N8G2 317 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 DCBLD1Q8N8Z6 715 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 FANCBQ8NB91 859 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 UCMAQ8WVF2 138 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 HVCN1Q96D96 273 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 CYFIP2Q96F07 1278 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 ZSWIM3Q96MP5 696 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 PYM1Q9BRP8 204 aaKnown RBP5.6□□□□□ -1.51
SS18-223ENST00000583595 KRTAP9-3Q9BYQ3 159 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 SENP6Q9GZR1 1112 aaPredicted RBP5.6□□□□□ -1.51
SS18-223ENST00000583595 TLR9Q9NR96 1032 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 RGL1Q9NZL6 768 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 SRRDQ9UH36 339 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 FEM1BQ9UK73 627 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 AJAP1Q9UKB5 411 aaPredicted RBP5.6□□□□□ -1.51
SS18-223ENST00000583595 ACTL7AQ9Y615 435 aa5.6□□□□□ -1.51
SS18-223ENST00000583595 PYCARD-AS1I3L0S3 204 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 SOAT2O75908 522 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 MATN4O95460 622 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 FTH1P19P0C7X4 201 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 GAAP10253 952 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 RARBP10826 455 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 IL1R1P14778 569 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 ADCY8P40145 1251 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 CARSP49589 748 aaKnown RBP5.59□□□□□ -1.51
SS18-223ENST00000583595 SESN2P58004 480 aaPredicted RBP5.59□□□□□ -1.51
SS18-223ENST00000583595 NOMO3P69849 1222 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 KIAA2012Q0VF49 1180 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 PRKG2Q13237 762 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 CUL4BQ13620 913 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 MST1LQ2TV78 715 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 C19orf54Q5BKX5 351 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 FASTKD5Q7L8L6 764 aaKnown RBP5.59□□□□□ -1.51
SS18-223ENST00000583595 TAS1R1Q7RTX1 841 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 MPP5Q8N3R9 675 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 TXNDC5Q8NBS9 432 aaKnown RBP5.59□□□□□ -1.51
SS18-223ENST00000583595 OR7D4Q8NG98 312 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 OR56A3Q8NH54 315 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 NUP133Q8WUM0 1156 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 HERVK_113Q902F9 699 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 HTRA1Q92743 480 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 CLIC6Q96NY7 704 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 NELL2Q99435 816 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 KATNAL1Q9BW62 490 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 BCO1Q9HAY6 547 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 SMYD2Q9NRG4 433 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 ARHGAP20Q9P2F6 1191 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 SAE1Q9UBE0 346 aaPredicted RBP5.59□□□□□ -1.51
SS18-223ENST00000583595 AASSQ9UDR5 926 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 TRPS1Q9UHF7 1281 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 CROTQ9UKG9 612 aa5.59□□□□□ -1.51
SS18-223ENST00000583595 MED16Q9Y2X0 877 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms