RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 PDE11AQ9HCR9 933 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 ST7Q9NRC1 585 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 SNX12Q9UMY4 172 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 DAAM1Q9Y4D1 1078 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 HYOU1Q9Y4L1 999 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 MTCL1Q9Y4B5 1905 aaKnown RBP10.63□□□□□ -0.71
MKS1-212ENST00000583577 GRID2IPA4D2P6 1211 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 ERICH4A6NGS2 130 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 PP2D1A8MPX8 630 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 BTNL10A8MVZ5 291 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 GAS2O43903 313 aaKnown RBP10.63□□□□□ -0.71
MKS1-212ENST00000583577 N4BP1O75113 896 aaKnown RBP10.63□□□□□ -0.71
MKS1-212ENST00000583577 EPB41P11171 864 aaKnown RBP10.63□□□□□ -0.71
MKS1-212ENST00000583577 PLCG1P19174 1290 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 CASP1P29466 404 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 CDC25AP30304 524 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 RFC5P40937 340 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 LMAN1P49257 510 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 CLCN3P51790 818 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 NPEPPSP55786 919 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 MARSP56192 900 aaKnown RBP10.63□□□□□ -0.71
MKS1-212ENST00000583577 ASIC1P78348 528 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 CCNI2Q6ZMN8 369 aaPredicted RBP10.63□□□□□ -0.71
MKS1-212ENST00000583577 LRRC55Q6ZSA7 311 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 SPATS2Q86XZ4 545 aaKnown RBP10.63□□□□□ -0.71
MKS1-212ENST00000583577 LRRC71Q8N4P6 559 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 ST13P5Q8NFI4 369 aaPredicted RBP10.63□□□□□ -0.71
MKS1-212ENST00000583577 PIGOQ8TEQ8 1089 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 SLC22A17Q8WUG5 538 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 CHP1Q99653 195 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 SFXN1Q9H9B4 322 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 BMP2KQ9NSY1 1161 aaPredicted RBP10.63□□□□□ -0.71
MKS1-212ENST00000583577 VPS18Q9P253 973 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 KIAA1024Q9UPX6 916 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 AKT3Q9Y243 479 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 SQORQ9Y6N5 450 aa10.63□□□□□ -0.71
MKS1-212ENST00000583577 ADAMTS20P59510 1910 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 ARHGEF35A5YM69 484 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 SRRM3A6NNA2 597 aaPredicted RBP10.62□□□□□ -0.71
MKS1-212ENST00000583577 NT5C1B-RDH14C9J2C7 533 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 H3BQF6 201 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 ZBTB39O15060 712 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 MAFO75444 373 aaPredicted RBP10.62□□□□□ -0.71
MKS1-212ENST00000583577 DGAT1O75907 488 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 RHOXF2BP0C7M4 288 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 IDEP14735 1019 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 RARRES1P49788 294 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 CDC42EP1Q00587 391 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 UBXN2BQ14CS0 331 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 IFI16Q16666 785 aaKnown RBP10.62□□□□□ -0.71
MKS1-212ENST00000583577 MIIPQ5JXC2 388 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 HYIQ5T013 277 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 ANKRD40Q6AI12 368 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 PRR23CQ6ZRP0 262 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 SLC24A5Q71RS6 500 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 KIAA0319LQ8IZA0 1049 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 TCP11Q8WWU5 503 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 CAVIN3Q969G5 261 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 SHDQ96IW2 340 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 CEP89Q96ST8 783 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 RHOXF2Q9BQY4 288 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 CELF4Q9BZC1 486 aaKnown RBP10.62□□□□□ -0.71
MKS1-212ENST00000583577 RASSF4Q9H2L5 321 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 NDST4Q9H3R1 872 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 DHX33Q9H6R0 707 aaKnown RBP10.62□□□□□ -0.71
MKS1-212ENST00000583577 RGS18Q9NS28 235 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 SEMA4GQ9NTN9 838 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 DNM3Q9UQ16 869 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 GINS2Q9Y248 185 aa10.62□□□□□ -0.71
MKS1-212ENST00000583577 BZW2Q9Y6E2 419 aaKnown RBP10.62□□□□□ -0.71
MKS1-212ENST00000583577 ATXN2Q99700 1313 aaKnown RBP10.61□□□□□ -0.71
MKS1-212ENST00000583577 IGKV6-21A0A0C4DH24 114 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 C9IYK1 514 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 RNF225M0QZC1 329 aaPredicted RBP10.61□□□□□ -0.71
MKS1-212ENST00000583577 PES1O00541 588 aaKnown RBP10.61□□□□□ -0.71
MKS1-212ENST00000583577 SHOX2O60902 331 aaPredicted RBP10.61□□□□□ -0.71
MKS1-212ENST00000583577 VTNP04004 478 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 STARD6P59095 220 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 FKBP3Q00688 224 aaKnown RBP10.61□□□□□ -0.71
MKS1-212ENST00000583577 EHHADHQ08426 723 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 RAD51AP2Q09MP3 1159 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 EMC2Q15006 297 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 ECM1Q16610 540 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 LAIR1Q6GTX8 287 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 PRR23BQ6ZRT6 265 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 SRLQ86TD4 932 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 VPS52Q8N1B4 723 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 SLC39A11Q8N1S5 342 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 LINC01465Q8N7H1 131 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 KDF1Q8NAX2 398 aaPredicted RBP10.61□□□□□ -0.71
MKS1-212ENST00000583577 NEK11Q8NG66 645 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 LARP4BQ92615 738 aaKnown RBP10.61□□□□□ -0.71
MKS1-212ENST00000583577 STAMQ92783 540 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 CALR3Q96L12 384 aaKnown RBP10.61□□□□□ -0.71
MKS1-212ENST00000583577 PCMTD1Q96MG8 357 aaPredicted RBP10.61□□□□□ -0.71
MKS1-212ENST00000583577 SCLT1Q96NL6 688 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 MYADMQ96S97 322 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 MMTAG2Q9BU76 263 aaKnown RBP10.61□□□□□ -0.71
MKS1-212ENST00000583577 TMEM117Q9H0C3 514 aa10.61□□□□□ -0.71
MKS1-212ENST00000583577 DEF6Q9H4E7 631 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms