RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 RPP25Q9BUL9 199 aaKnown RBP26.81■■□□□ 1.88
TSEN54-209ENST00000583454 BACE2Q9Y5Z0 518 aa26.81■■□□□ 1.88
TSEN54-209ENST00000583454 COL4A3Q01955 1670 aa26.81■■□□□ 1.88
TSEN54-209ENST00000583454 CCL16O15467 120 aa26.8■■□□□ 1.88
TSEN54-209ENST00000583454 MCM4P33991 863 aa26.8■■□□□ 1.88
TSEN54-209ENST00000583454 MORC3Q14149 939 aa26.8■■□□□ 1.88
TSEN54-209ENST00000583454 CENPPQ6IPU0 288 aa26.8■■□□□ 1.88
TSEN54-209ENST00000583454 ASCL5Q7RTU5 278 aa26.8■■□□□ 1.88
TSEN54-209ENST00000583454 ADSSL1Q8N142 457 aa26.8■■□□□ 1.88
TSEN54-209ENST00000583454 C1orf127Q8N9H9 656 aa26.8■■□□□ 1.88
TSEN54-209ENST00000583454 GPR152Q8TDT2 470 aa26.8■■□□□ 1.88
TSEN54-209ENST00000583454 FGF14Q92915 247 aa26.8■■□□□ 1.88
TSEN54-209ENST00000583454 RTP3Q9BQQ7 232 aa26.8■■□□□ 1.88
TSEN54-209ENST00000583454 GZF1Q9H116 711 aaPredicted RBP26.8■■□□□ 1.88
TSEN54-209ENST00000583454 PCDHB8Q9UN66 801 aa26.8■■□□□ 1.88
TSEN54-209ENST00000583454 CDY1Q9Y6F8 540 aa26.8■■□□□ 1.88
TSEN54-209ENST00000583454 ZFP37Q9Y6Q3 630 aaPredicted RBP26.8■■□□□ 1.88
TSEN54-209ENST00000583454 PTPRJQ12913 1337 aa26.8■■□□□ 1.88
TSEN54-209ENST00000583454 SPTLC1O15269 473 aa26.79■■□□□ 1.88
TSEN54-209ENST00000583454 BMP6P22004 513 aa26.79■■□□□ 1.88
TSEN54-209ENST00000583454 CASP4P49662 377 aa26.79■■□□□ 1.88
TSEN54-209ENST00000583454 MRPL58Q14197 206 aaKnown RBP26.79■■□□□ 1.88
TSEN54-209ENST00000583454 DUOXA2Q1HG44 320 aa26.79■■□□□ 1.88
TSEN54-209ENST00000583454 WDR49Q8IV35 697 aa26.79■■□□□ 1.88
TSEN54-209ENST00000583454 DTWD2Q8NBA8 298 aa26.79■■□□□ 1.88
TSEN54-209ENST00000583454 OR5B17Q8NGF7 314 aa26.79■■□□□ 1.88
TSEN54-209ENST00000583454 ITFG1Q8TB96 612 aa26.79■■□□□ 1.88
TSEN54-209ENST00000583454 FAM84AQ96KN4 292 aa26.79■■□□□ 1.88
TSEN54-209ENST00000583454 SLC2A4RGQ9NR83 387 aa26.79■■□□□ 1.88
TSEN54-209ENST00000583454 HCFC1R1Q9NWW0 138 aa26.79■■□□□ 1.88
TSEN54-209ENST00000583454 KIAA1468Q9P260 1216 aa26.79■■□□□ 1.88
TSEN54-209ENST00000583454 CDH7Q9ULB5 785 aa26.79■■□□□ 1.88
TSEN54-209ENST00000583454 CA14Q9ULX7 337 aa26.79■■□□□ 1.88
TSEN54-209ENST00000583454 MIA3Q5JRA6 1907 aa26.78■■□□□ 1.88
TSEN54-209ENST00000583454 CAMK4Q16566 473 aa26.78■■□□□ 1.88
TSEN54-209ENST00000583454 EDRF1Q3B7T1 1238 aa26.78■■□□□ 1.88
TSEN54-209ENST00000583454 ISM2Q6H9L7 571 aa26.78■■□□□ 1.88
TSEN54-209ENST00000583454 PARM1Q6UWI2 310 aa26.78■■□□□ 1.88
TSEN54-209ENST00000583454 ANKS3Q6ZW76 656 aa26.78■■□□□ 1.88
TSEN54-209ENST00000583454 FGF13Q92913 245 aa26.78■■□□□ 1.88
TSEN54-209ENST00000583454 CLSTN2Q9H4D0 955 aa26.78■■□□□ 1.88
TSEN54-209ENST00000583454 ITGA11Q9UKX5 1188 aa26.78■■□□□ 1.88
TSEN54-209ENST00000583454 FANCMQ8IYD8 2048 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 PRR23AA6NEV1 266 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 MAPK13O15264 365 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 TBC1D4O60343 1298 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 NR2F2P24468 414 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 RPL13P26373 211 aaKnown RBP26.77■■□□□ 1.88
TSEN54-209ENST00000583454 UVSSAQ2YD98 709 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 VARS2Q5ST30 1063 aaKnown RBP26.77■■□□□ 1.88
TSEN54-209ENST00000583454 LMBRD2Q68DH5 695 aaPredicted RBP26.77■■□□□ 1.88
TSEN54-209ENST00000583454 APPL2Q8NEU8 664 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 PLEKHO2Q8TD55 490 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 CCDC127Q96BQ5 260 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 BORCS6Q96GS4 357 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 ANKRD36BP1Q96IX9 119 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 FNBP1Q96RU3 617 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 CGRRF1Q99675 332 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 MTMR12Q9C0I1 747 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 TBC1D17Q9HA65 648 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 DNMT3BQ9UBC3 853 aaKnown RBP26.77■■□□□ 1.88
TSEN54-209ENST00000583454 SIX4Q9UIU6 781 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 DMXL1Q9Y485 3027 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 DCHS1Q96JQ0 3298 aa26.77■■□□□ 1.88
TSEN54-209ENST00000583454 GOLGA6L22H0YM25 854 aa26.76■■□□□ 1.87
TSEN54-209ENST00000583454 TULP1O00294 542 aaPredicted RBP26.76■■□□□ 1.87
TSEN54-209ENST00000583454 XYLBO75191 536 aa26.76■■□□□ 1.87
TSEN54-209ENST00000583454 ITGB3P05106 788 aa26.76■■□□□ 1.87
TSEN54-209ENST00000583454 TMEM191BP0C7N4 346 aa26.76■■□□□ 1.87
TSEN54-209ENST00000583454 DLATP10515 647 aaKnown RBP26.76■■□□□ 1.87
TSEN54-209ENST00000583454 TAF6P49848 677 aa26.76■■□□□ 1.87
TSEN54-209ENST00000583454 CLDN10P78369 228 aa26.76■■□□□ 1.87
TSEN54-209ENST00000583454 SCARA3Q6AZY7 606 aa26.76■■□□□ 1.87
TSEN54-209ENST00000583454 SLC8B1Q6J4K2 584 aa26.76■■□□□ 1.87
TSEN54-209ENST00000583454 FRMD5Q7Z6J6 570 aa26.76■■□□□ 1.87
TSEN54-209ENST00000583454 CSGALNACT2Q8N6G5 542 aa26.76■■□□□ 1.87
TSEN54-209ENST00000583454 PARD3BQ8TEW8 1205 aa26.76■■□□□ 1.87
TSEN54-209ENST00000583454 SENP8Q96LD8 212 aa26.76■■□□□ 1.87
TSEN54-209ENST00000583454 FRMD4BQ9Y2L6 1034 aa26.76■■□□□ 1.87
TSEN54-209ENST00000583454 CACNA1IQ9P0X4 2223 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 PPP1R3GB7ZBB8 358 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 TNNC2P02585 160 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 CD44P16070 742 aaKnown RBP26.75■■□□□ 1.87
TSEN54-209ENST00000583454 POLR2BP30876 1174 aaKnown RBP26.75■■□□□ 1.87
TSEN54-209ENST00000583454 PPP1R2P41236 205 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 PNPLA4P41247 253 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 RBP5P82980 135 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 ROR1Q01973 937 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 ADAM9Q13443 819 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 ANGPT1Q15389 498 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 CEP135Q66GS9 1140 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 PHLDB3Q6NSJ2 640 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 POTEHQ6S545 545 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 DSTYKQ6XUX3 929 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 RTL10Q7L3V2 364 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 LRRC52Q8N7C0 313 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 TRIML1Q8N9V2 468 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 ZNF516Q92618 1163 aa26.75■■□□□ 1.87
TSEN54-209ENST00000583454 DHTKD1Q96HY7 919 aaPredicted RBP26.75■■□□□ 1.87
TSEN54-209ENST00000583454 ARHGEF3Q9NR81 526 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms