RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 M0QZQ0 153 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TLL1O43897 1013 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TADA2AO75478 443 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 SOX5P35711 763 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 STAT1P42224 750 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 BRCC3P46736 316 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 ALDH7A1P49419 539 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 GSDMDP57764 484 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 DSTYKQ6XUX3 929 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 FAM71AQ8IYT1 594 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 FIBCD1Q8N539 461 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 SP7Q8TDD2 431 aaPredicted RBP17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 SYN2Q92777 582 aaPredicted RBP17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 SUSD3Q96L08 255 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 DNAJC7Q99615 494 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 SMYD3Q9H7B4 428 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 CISHQ9NSE2 258 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 MARCH5Q9NX47 278 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 AIPL1Q9NZN9 384 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 BDP1A6H8Y1 2624 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 CARNS1A5YM72 827 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 LRRC53A6NM62 1247 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 NT5C1B-RDH14C9J2C7 533 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 F8VZ95 297 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 HUS1O60921 280 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TACC1O75410 805 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 LAG3P18627 525 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 HNRNPH3P31942 346 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 RAP1GAPP47736 663 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 YWHAEP62258 255 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 SPOUT1Q5T280 376 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 SFMBT2Q5VUG0 894 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 KCNT2Q6UVM3 1135 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 SCARA5Q6ZMJ2 495 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 IRF2BP2Q7Z5L9 587 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 MICALL1Q8N3F8 863 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TTC39CQ8N584 583 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 APPL2Q8NEU8 664 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 HASPINQ8TF76 798 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 MRPL45Q9BRJ2 306 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 ADAM28Q9UKQ2 775 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 L1RE1Q9UN81 338 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 PCDHB4Q9Y5E5 795 aa17.48■□□□□ 0.39
CDK5RAP3-228ENST00000583363 PRRC2BQ5JSZ5 2229 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-228ENST00000583363 I3L4J1 428 aa17.47■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TRAPPC3O43617 180 aa17.47■□□□□ 0.39
CDK5RAP3-228ENST00000583363 LINC00271P0C7V0 271 aa17.47■□□□□ 0.39
CDK5RAP3-228ENST00000583363 PNMA6AP0CW24 399 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-228ENST00000583363 PBX3P40426 434 aa17.47■□□□□ 0.39
CDK5RAP3-228ENST00000583363 PDCL2Q8N4E4 241 aa17.47■□□□□ 0.39
CDK5RAP3-228ENST00000583363 COLGALT1Q8NBJ5 622 aa17.47■□□□□ 0.39
CDK5RAP3-228ENST00000583363 CLP1Q92989 425 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-228ENST00000583363 ZNF558Q96NG5 402 aa17.47■□□□□ 0.39
CDK5RAP3-228ENST00000583363 NECAB3Q96P71 396 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-228ENST00000583363 PANX2Q96RD6 677 aa17.47■□□□□ 0.39
CDK5RAP3-228ENST00000583363 ABHD10Q9NUJ1 306 aa17.47■□□□□ 0.39
CDK5RAP3-228ENST00000583363 BARX2Q9UMQ3 279 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-228ENST00000583363 ARHGEF37A1IGU5 675 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 LCHNA4D1U4 455 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 RFXAPO00287 272 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 GABRDO14764 452 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 CYP26A1O43174 497 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 GFPT2O94808 682 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 EFEMP2O95967 443 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 CYP11A1P05108 521 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 CD58P19256 250 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TYMPP19971 482 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 WARSP23381 471 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 CLCN1P35523 988 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 GNL1P36915 607 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 USP8P40818 1118 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TFF2Q03403 129 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 INCA1Q0VD86 236 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TSR1Q2NL82 804 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 WSCD1Q658N2 575 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 E4F1Q66K89 784 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 WDR59Q6PJI9 974 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TMEM270Q6UE05 265 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TMEM173Q86WV6 379 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 FMNL3Q8IVF7 1028 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 SLC39A11Q8N1S5 342 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TMEM86AQ8N2M4 240 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 WHAMMQ8TF30 809 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 BCL7CQ8WUZ0 217 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 KBTBD7Q8WVZ9 684 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 IGSF21Q96ID5 467 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 GPR62Q9BZJ7 368 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 AAASQ9NRG9 546 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 DSEQ9UL01 958 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 PCDHB8Q9UN66 801 aa17.46■□□□□ 0.39
CDK5RAP3-228ENST00000583363 CILPO75339 1184 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 PTMAP06454 111 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 CA3P07451 260 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 CCDC172P0C7W6 258 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ODC1P11926 461 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 BMP1P13497 986 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 KRT5P13647 590 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 FERP16591 822 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ZNF132P52740 706 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ELAVL2Q12926 359 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms