RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 SPC24Q8NBT2 197 aa14.6□□□□□ -0.07
ITGB4-209ENST00000583327 ZNF397Q8NF99 534 aaPredicted RBP14.6□□□□□ -0.07
ITGB4-209ENST00000583327 HASPINQ8TF76 798 aa14.6□□□□□ -0.07
ITGB4-209ENST00000583327 MMS19Q96T76 1030 aa14.6□□□□□ -0.07
ITGB4-209ENST00000583327 SYT11Q9BT88 431 aa14.6□□□□□ -0.07
ITGB4-209ENST00000583327 PLVAPQ9BX97 442 aa14.6□□□□□ -0.07
ITGB4-209ENST00000583327 DSEQ9UL01 958 aa14.6□□□□□ -0.07
ITGB4-209ENST00000583327 STXBP5LQ9Y2K9 1186 aa14.6□□□□□ -0.07
ITGB4-209ENST00000583327 PCDHB12Q9Y5F1 795 aa14.6□□□□□ -0.07
ITGB4-209ENST00000583327 RB1P06400 928 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 ODC1P11926 461 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 LMO2P25791 158 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 PPM1AP35813 382 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 GNL1P36915 607 aaPredicted RBP14.59□□□□□ -0.07
ITGB4-209ENST00000583327 RAP1GAPP47736 663 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 LHX1P48742 406 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 RAD23BP54727 409 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 ERVK-21P61565 698 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 CDK17Q00537 523 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 TAP1Q03518 808 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 CCDC173Q0VFZ6 552 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 RAPGEF1Q13905 1077 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 HGSNATQ68CP4 663 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.59□□□□□ -0.07
ITGB4-209ENST00000583327 CCDC186Q7Z3E2 898 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 ADGRF2Q8IZF7 708 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 SLC4A11Q8NBS3 891 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 SAMD11Q96NU1 681 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 SPAG5Q96R06 1193 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 PANX2Q96RD6 677 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 TWNKQ96RR1 684 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 PBX4Q9BYU1 374 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 ELOVL4Q9GZR5 314 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 ABHD10Q9NUJ1 306 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 STK39Q9UEW8 545 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 LZTS1Q9Y250 596 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 RWDD3Q9Y3V2 267 aa14.59□□□□□ -0.07
ITGB4-209ENST00000583327 SF3B1O75533 1304 aaKnown RBP eCLIP14.59□□□□□ -0.07
ITGB4-209ENST00000583327 A0A1W2PPC1 479 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 LILRB3O75022 631 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 CAPN15O75808 1086 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 FGF18O76093 207 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 SOD2P04179 222 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 CA3P07451 260 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 PAEPP09466 180 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 TPM1P09493 284 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 PNMA6AP0CW24 399 aaPredicted RBP14.58□□□□□ -0.08
ITGB4-209ENST00000583327 FERP16591 822 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 TKTP29401 623 aaKnown RBP14.58□□□□□ -0.08
ITGB4-209ENST00000583327 PBX2P40425 430 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 NDST1P52848 882 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 GSDMDP57764 484 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 GOLGA8FQ08AF8 430 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 GOLGA8DPQ0D2H9 430 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 SPOUT1Q5T280 376 aaKnown RBP14.58□□□□□ -0.08
ITGB4-209ENST00000583327 FAM171A1Q5VUB5 890 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 SFMBT2Q5VUG0 894 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 KIAA0319Q5VV43 1072 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 SCARA5Q6ZMJ2 495 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 FMNL3Q8IVF7 1028 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 KLHL23Q8NBE8 558 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 OLIG1Q8TAK6 271 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 DDX1Q92499 740 aaKnown RBP14.58□□□□□ -0.08
ITGB4-209ENST00000583327 TMEM176AQ96HP8 235 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 PKMYT1Q99640 499 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 ACBD6Q9BR61 282 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 HMGXB4Q9UGU5 601 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 KIAA1257Q9ULG3 409 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 PCDHB4Q9Y5E5 795 aa14.58□□□□□ -0.08
ITGB4-209ENST00000583327 TIMM13Q9Y5L4 95 aaPredicted RBP14.58□□□□□ -0.08
ITGB4-209ENST00000583327 LAMA2P24043 3122 aaKnown RBP14.57□□□□□ -0.08
ITGB4-209ENST00000583327 KIAA1671Q9BY89 1806 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 CYP26A1O43174 497 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 GFPT2O94808 682 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 CD58P19256 250 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 BPIFB4P59827 614 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 SMAD3P84022 425 aaKnown RBP14.57□□□□□ -0.08
ITGB4-209ENST00000583327 DSG1Q02413 1049 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 RAB30Q15771 203 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 USP41Q3LFD5 358 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 RTP2Q5QGT7 225 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 OVOS1Q6IE37 1185 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 FAM171BQ6P995 826 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 TMEM270Q6UE05 265 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 METTL23Q86XA0 190 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 TMEM139Q8IV31 216 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 RBBP8NLQ8NC74 664 aaPredicted RBP14.57□□□□□ -0.08
ITGB4-209ENST00000583327 LNX1Q8TBB1 728 aaPredicted RBP14.57□□□□□ -0.08
ITGB4-209ENST00000583327 SPPL3Q8TCT6 385 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 TMEM169Q96HH4 297 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 ZSWIM1Q9BR11 485 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 C17orf80Q9BSJ5 609 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 HERC2P3Q9BVR0 1158 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 NT5C1AQ9BXI3 368 aa14.57□□□□□ -0.08
ITGB4-209ENST00000583327 OXCT2Q9BYC2 517 aaPredicted RBP14.57□□□□□ -0.08
ITGB4-209ENST00000583327 DDX43Q9NXZ2 648 aaKnown RBP14.57□□□□□ -0.08
ITGB4-209ENST00000583327 HCRTO43612 131 aa14.56□□□□□ -0.08
ITGB4-209ENST00000583327 CYP11B1P15538 503 aa14.56□□□□□ -0.08
ITGB4-209ENST00000583327 KRT17Q04695 432 aa14.56□□□□□ -0.08
ITGB4-209ENST00000583327 YWHAHQ04917 246 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms