RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SLC39A13Q96H72 371 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 LRIG1Q96JA1 1093 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 TRIB1Q96RU8 372 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 MYD88Q99836 296 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 ELAC2Q9BQ52 826 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 ZNF700Q9H0M5 742 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 AFF4Q9UHB7 1163 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 TMX2Q9Y320 296 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 PLEKHM1Q9Y4G2 1056 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 F8W8V4 182 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 NCR1O76036 304 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 THP07101 528 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 ELANEP08246 267 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 SLC11A2P49281 568 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 ALDH5A1P51649 535 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 RPS16P62249 146 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 MXRA7P84157 204 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 PIGFQ07326 219 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 BIRC2Q13490 618 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 CDSNQ15517 529 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 AMOTQ4VCS5 1084 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 FAM160B1Q5W0V3 765 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 LMBRD2Q68DH5 695 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 PMM1Q92871 262 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 RPS6KC1Q96S38 1066 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 CDK5RAP1Q96SZ6 601 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 DPH1Q9BZG8 443 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 SIK2Q9H0K1 926 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 ETAA1Q9NY74 926 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 COL20A1Q9P218 1284 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 FNIP2Q9P278 1114 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 TESMINQ9Y4I5 508 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 FPGT-TNNI3KV9GXZ4 949 aa6.86□□□□□ -1.31
SMARCE1-219ENST00000583294 POM121BA6NF01 834 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 RPL17P18621 184 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 FDXRP22570 491 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 SERPINB3P29508 390 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 CASP5P51878 434 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 ZNF543Q08ER8 600 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 RAB32Q13637 225 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 BOP1Q14137 746 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 SLC44A4Q53GD3 710 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 LRRC55Q6ZSA7 311 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 MORC1Q86VD1 984 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 SKAP1Q86WV1 359 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 TMEM132CQ8N3T6 1108 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 CCDC33Q8N5R6 958 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 ZNF483Q8TF39 744 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 RNF31Q96EP0 1072 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 CCDC138Q96M89 665 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 TTYH3Q9C0H2 523 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 PNPLA8Q9NP80 782 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 AKIP1Q9NQ31 210 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 AURKAIP1Q9NWT8 199 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 RNF181Q9P0P0 153 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 CEP72Q9P209 647 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 XPR1Q9UBH6 696 aa6.85□□□□□ -1.31
SMARCE1-219ENST00000583294 CCDC195A0A1B0GUA6 201 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 TRIM43BA6NCK2 446 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 RNASET2O00584 256 aaKnown RBP6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 NDUFA10O95299 355 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 TNFRSF1AP19438 455 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 POU6F2P78424 691 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 SLC25A3Q00325 362 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 MC2RQ01718 297 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 OS9Q13438 667 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 KLHDC7AQ5VTJ3 777 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 B3GNTL1Q67FW5 361 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 TAF2Q6P1X5 1199 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 PPP1R32Q7Z5V6 425 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 MICU3Q86XE3 530 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 FAM186BQ8IYM0 893 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 SAMD3Q8N6K7 520 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 RAPGEF4Q8WZA2 1011 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 TRIM43Q96BQ3 446 aaPredicted RBP6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 NMD3Q96D46 503 aaKnown RBP6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 RIPOR3Q96MK2 946 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 SLC46A1Q96NT5 459 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 SPATA5L1Q9BVQ7 753 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 C1QTNF3Q9BXJ4 246 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 STK31Q9BXU1 1019 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 SLC46A2Q9BY10 475 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 ZNF518BQ9C0D4 1074 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 SMOC2Q9H3U7 446 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 PARPBPQ9NWS1 579 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 CTTNBP2NLQ9P2B4 639 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 HESX1Q9UBX0 185 aa6.84□□□□□ -1.31
SMARCE1-219ENST00000583294 A0A087WWL8 130 aa6.83□□□□□ -1.32
SMARCE1-219ENST00000583294 TOR1BO14657 336 aa6.83□□□□□ -1.32
SMARCE1-219ENST00000583294 MATN3O15232 486 aa6.83□□□□□ -1.32
SMARCE1-219ENST00000583294 CFIP05156 583 aa6.83□□□□□ -1.32
SMARCE1-219ENST00000583294 C1SP09871 688 aa6.83□□□□□ -1.32
SMARCE1-219ENST00000583294 PARP1P09874 1014 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-219ENST00000583294 KCNA2P16389 499 aa6.83□□□□□ -1.32
SMARCE1-219ENST00000583294 STT3AP46977 705 aa6.83□□□□□ -1.32
SMARCE1-219ENST00000583294 RESTQ13127 1097 aa6.83□□□□□ -1.32
SMARCE1-219ENST00000583294 DCAF12L1Q5VU92 463 aa6.83□□□□□ -1.32
SMARCE1-219ENST00000583294 ZNF276Q8N554 614 aa6.83□□□□□ -1.32
SMARCE1-219ENST00000583294 PSD4Q8NDX1 1056 aa6.83□□□□□ -1.32
SMARCE1-219ENST00000583294 OR56A3Q8NH54 315 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms