RNA–Protein interactions for RNA: ENST00000583213.1

TNFAIP1-206, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-206ENST00000583213 DCLK2Q8N568 766 aa17.42■□□□□ 0.38
TNFAIP1-206ENST00000583213 ATRIPQ8WXE1 791 aa17.42■□□□□ 0.38
TNFAIP1-206ENST00000583213 FAM3CQ92520 227 aa17.42■□□□□ 0.38
TNFAIP1-206ENST00000583213 STK17AQ9UEE5 414 aa17.42■□□□□ 0.38
TNFAIP1-206ENST00000583213 TISP43B9A030 160 aa17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 KRT18P05783 430 aaKnown RBP17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 ADSSP30520 456 aa17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 ACOT2P49753 483 aa17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 SMARCB1Q12824 385 aa17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 STXBP5Q5T5C0 1151 aa17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 ADALQ6DHV7 355 aa17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 ARMCX5Q6P1M9 558 aa17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 USP49Q70CQ1 688 aa17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 NT5DC4Q86YG4 428 aa17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 C2orf15Q8WU43 125 aaKnown RBP17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 EPSTI1Q96J88 318 aa17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 LRRC3BQ96PB8 259 aa17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 UPF2Q9HAU5 1272 aaKnown RBP17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 IL21Q9HBE4 155 aa17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 SEL1LQ9UBV2 794 aa17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 AGO2Q9UKV8 859 aaKnown RBP17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 NDRG2Q9UN36 371 aaKnown RBP17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 SMG5Q9UPR3 1016 aaKnown RBP17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 SLC27A5Q9Y2P5 690 aa17.41■□□□□ 0.38
TNFAIP1-206ENST00000583213 PAPSS2O95340 614 aaPredicted RBP17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 ATF6P18850 670 aa17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 TUFMP49411 452 aaKnown RBP17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 TAF6P49848 677 aa17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 GAS6Q14393 721 aa17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 PUM1Q14671 1186 aaKnown RBP eCLIP17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 TSSK4Q6SA08 328 aa17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 ITIH5Q86UX2 942 aa17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 ARID3BQ8IVW6 561 aaPredicted RBP17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 EFCAB13Q8IY85 973 aa17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 GPR161Q8N6U8 529 aaKnown RBP17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 KRI1Q8N9T8 703 aaKnown RBP17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 DNAJC19Q96DA6 116 aa17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 SLITRK6Q9H5Y7 841 aa17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 C8orf33Q9H7E9 229 aaPredicted RBP17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 FBXO2Q9UK22 296 aaPredicted RBP17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 DENND4CQ5VZ89 1909 aa17.4■□□□□ 0.38
TNFAIP1-206ENST00000583213 TCHHQ07283 1943 aa17.39■□□□□ 0.37
TNFAIP1-206ENST00000583213 MYBPHLA2RUH7 354 aa17.39■□□□□ 0.37
TNFAIP1-206ENST00000583213 TGM1P22735 817 aa17.39■□□□□ 0.37
TNFAIP1-206ENST00000583213 CCR3P51677 355 aa17.39■□□□□ 0.37
TNFAIP1-206ENST00000583213 NRLP54845 237 aa17.39■□□□□ 0.37
TNFAIP1-206ENST00000583213 WDR44Q5JSH3 913 aa17.39■□□□□ 0.37
TNFAIP1-206ENST00000583213 SFR1Q86XK3 245 aa17.39■□□□□ 0.37
TNFAIP1-206ENST00000583213 RASSF8Q8NHQ8 419 aa17.39■□□□□ 0.37
TNFAIP1-206ENST00000583213 FAM212AQ96EL1 285 aa17.39■□□□□ 0.37
TNFAIP1-206ENST00000583213 HINFPQ9BQA5 517 aa17.39■□□□□ 0.37
TNFAIP1-206ENST00000583213 ZHX3Q9H4I2 956 aa17.39■□□□□ 0.37
TNFAIP1-206ENST00000583213 LMAN1LQ9HAT1 526 aa17.39■□□□□ 0.37
TNFAIP1-206ENST00000583213 DPP3Q9NY33 737 aa17.39■□□□□ 0.37
TNFAIP1-206ENST00000583213 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
TNFAIP1-206ENST00000583213 CLIC4Q9Y696 253 aa17.39■□□□□ 0.37
TNFAIP1-206ENST00000583213 FRMD3A2A2Y4 597 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 CYB561D2O14569 222 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 SOAT2O75908 522 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 IL18RAPO95256 599 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 CCNE1P24864 410 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 GABRR2P28476 465 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 POSTNQ15063 836 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 SLC39A12Q504Y0 691 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 ARHGAP29Q52LW3 1261 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 LRRTM3Q86VH5 581 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 RALGPS2Q86X27 583 aaPredicted RBP17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 SPEM1Q8N4L4 309 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 CXorf38Q8TB03 319 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 SPPL2BQ8TCT7 592 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 IKZF4Q9H2S9 585 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 TASP1Q9H6P5 420 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 OLFML3Q9NRN5 406 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 ZMYM5Q9UJ78 669 aa17.38■□□□□ 0.37
TNFAIP1-206ENST00000583213 OBSL1O75147 1896 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 MYMKA6NI61 221 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 PRAMEF12O95522 483 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 HAPLN1P10915 354 aaPredicted RBP17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 GAP43P17677 238 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 PDCP20941 246 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 CDC25CP30307 473 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 CTHP32929 405 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 RESTQ13127 1097 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 PPP2R5DQ14738 602 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 L1TD1Q5T7N2 865 aaKnown RBP17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 GPR158Q5T848 1215 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 WSCD1Q658N2 575 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 YAF2Q8IY57 180 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 CSGALNACT1Q8TDX6 532 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 LPIN3Q9BQK8 851 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 PYM1Q9BRP8 204 aaKnown RBP17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 ATXN3LQ9H3M9 355 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 NCDNQ9UBB6 729 aa17.37■□□□□ 0.37
TNFAIP1-206ENST00000583213 SPTBN2O15020 2390 aa17.36■□□□□ 0.37
TNFAIP1-206ENST00000583213 SOBPA7XYQ1 873 aa17.36■□□□□ 0.37
TNFAIP1-206ENST00000583213 KPNA7A9QM74 516 aa17.36■□□□□ 0.37
TNFAIP1-206ENST00000583213 SPECC1L-ADORA2AF8WAN1 911 aa17.36■□□□□ 0.37
TNFAIP1-206ENST00000583213 CENPBP07199 599 aaPredicted RBP17.36■□□□□ 0.37
TNFAIP1-206ENST00000583213 HOXA6P31267 233 aa17.36■□□□□ 0.37
TNFAIP1-206ENST00000583213 PNPLA4P41247 253 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms