RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SYT2Q8N9I0 419 aaPredicted RBP14.73□□□□□ -0.05
SS18-222ENST00000582792 ATAD1Q8NBU5 361 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 TTC8Q8TAM2 541 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 FAM200AQ8TCP9 573 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 ZFYVE19Q96K21 471 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 ATXN3LQ9H3M9 355 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 C2orf42Q9NWW7 574 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 GTSE1Q9NYZ3 720 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 HSFX1Q9UBD0 423 aa14.73□□□□□ -0.05
SS18-222ENST00000582792 LACTBL1A8MY62 500 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 H0YCG3 227 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 GABRR2P28476 465 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 GUCY2FP51841 1108 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 NCKAP1LP55160 1127 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 PON2Q15165 354 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 KYAT1Q16773 422 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 ST3GAL2Q16842 350 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 ARHGAP15Q53QZ3 475 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 CEP68Q76N32 757 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 ITIH5Q86UX2 942 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 KCTD17Q8N5Z5 321 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 FAM160A2Q8N612 972 aaPredicted RBP14.72□□□□□ -0.05
SS18-222ENST00000582792 TTC9BQ8N6N2 239 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 DDX1Q92499 740 aaKnown RBP14.72□□□□□ -0.05
SS18-222ENST00000582792 KCNN1Q92952 543 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 BICD1Q96G01 975 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 PNMA5Q96PV4 448 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 TSPAN18Q96SJ8 248 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 TMEM209Q96SK2 561 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.72□□□□□ -0.05
SS18-222ENST00000582792 KCND2Q9NZV8 630 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 SMC3Q9UQE7 1217 aa14.72□□□□□ -0.05
SS18-222ENST00000582792 TSC2P49815 1807 aa14.71□□□□□ -0.05
SS18-222ENST00000582792 PPEF2O14830 753 aa14.71□□□□□ -0.05
SS18-222ENST00000582792 FAM189A1O60320 539 aa14.71□□□□□ -0.05
SS18-222ENST00000582792 SOAT2O75908 522 aa14.71□□□□□ -0.05
SS18-222ENST00000582792 PRAMEF12O95522 483 aa14.71□□□□□ -0.05
SS18-222ENST00000582792 ADRB2P07550 413 aa14.71□□□□□ -0.05
SS18-222ENST00000582792 ODC1P11926 461 aa14.71□□□□□ -0.05
SS18-222ENST00000582792 PAX3P23760 479 aa14.71□□□□□ -0.05
SS18-222ENST00000582792 SLC12A3P55017 1021 aa14.71□□□□□ -0.05
SS18-222ENST00000582792 LILRA4P59901 499 aa14.71□□□□□ -0.05
SS18-222ENST00000582792 PLCB2Q00722 1185 aa14.71□□□□□ -0.05
SS18-222ENST00000582792 CACNB1Q02641 598 aaPredicted RBP14.71□□□□□ -0.05
SS18-222ENST00000582792 ZRSR1Q15695 479 aaKnown RBP14.71□□□□□ -0.05
SS18-222ENST00000582792 ENOX2Q16206 610 aaKnown RBP14.71□□□□□ -0.05
SS18-222ENST00000582792 SPATA1Q5VX52 437 aa14.71□□□□□ -0.05
SS18-222ENST00000582792 ARMCX5Q6P1M9 558 aa14.71□□□□□ -0.05
SS18-222ENST00000582792 BPIFB1Q8TDL5 484 aa14.71□□□□□ -0.05
SS18-222ENST00000582792 TASP1Q9H6P5 420 aa14.71□□□□□ -0.05
SS18-222ENST00000582792 LARSQ9P2J5 1176 aaKnown RBP14.71□□□□□ -0.05
SS18-222ENST00000582792 KIF26AQ9ULI4 1882 aaPredicted RBP14.7□□□□□ -0.06
SS18-222ENST00000582792 FRYQ5TBA9 3013 aa14.7□□□□□ -0.06
SS18-222ENST00000582792 OGTO15294 1046 aa14.7□□□□□ -0.06
SS18-222ENST00000582792 PLA2G4BP0C869 781 aa14.7□□□□□ -0.06
SS18-222ENST00000582792 GJB2P29033 226 aa14.7□□□□□ -0.06
SS18-222ENST00000582792 HOXC13P31276 330 aa14.7□□□□□ -0.06
SS18-222ENST00000582792 LIG4P49917 911 aa14.7□□□□□ -0.06
SS18-222ENST00000582792 TNK2Q07912 1038 aa14.7□□□□□ -0.06
SS18-222ENST00000582792 ITPRIPL2Q3MIP1 535 aa14.7□□□□□ -0.06
SS18-222ENST00000582792 SENP8Q96LD8 212 aa14.7□□□□□ -0.06
SS18-222ENST00000582792 RPF1Q9H9Y2 349 aaKnown RBP14.7□□□□□ -0.06
SS18-222ENST00000582792 IL21Q9HBE4 155 aa14.7□□□□□ -0.06
SS18-222ENST00000582792 GREB1Q4ZG55 1949 aa14.7□□□□□ -0.06
SS18-222ENST00000582792 CNOT1A5YKK6 2376 aaKnown RBP14.69□□□□□ -0.06
SS18-222ENST00000582792 CEP295Q9C0D2 2601 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 NPHP3-ACAD11A0A0J9YXS1 232 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 HNRNPDLO14979 420 aaKnown RBP14.69□□□□□ -0.06
SS18-222ENST00000582792 PIGRP01833 764 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 CYP11A1P05108 521 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 ATF6P18850 670 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 CDC25CP30307 473 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 TUFMP49411 452 aaKnown RBP14.69□□□□□ -0.06
SS18-222ENST00000582792 LIMK1P53667 647 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 CYP4F8P98187 520 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 ATP2C1P98194 919 aaPredicted RBP14.69□□□□□ -0.06
SS18-222ENST00000582792 VEPH1Q14D04 833 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 PTPAQ15257 358 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 AASDHQ4L235 1098 aaPredicted RBP14.69□□□□□ -0.06
SS18-222ENST00000582792 ARSHQ5FYA8 562 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 JADE1Q6IE81 842 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 CD302Q8IX05 232 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 OR10T2Q8NGX3 314 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 LOXL4Q96JB6 756 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 CHAMP1Q96JM3 812 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 PLIN2Q99541 437 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 SEPT5Q99719 369 aaPredicted RBP14.69□□□□□ -0.06
SS18-222ENST00000582792 LPIN3Q9BQK8 851 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 THG1LQ9NWX6 298 aaKnown RBP14.69□□□□□ -0.06
SS18-222ENST00000582792 TBX20Q9UMR3 447 aa14.69□□□□□ -0.06
SS18-222ENST00000582792 ANK1P16157 1881 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 A0A0B4J269 797 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 CCDC163A0A0D9SF12 145 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 AXIN1O15169 862 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 EXTL3O43909 919 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 ZNF806P0C7X5 589 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 PDIA4P13667 645 aaKnown RBP14.68□□□□□ -0.06
SS18-222ENST00000582792 PDCP20941 246 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 SCP2P22307 547 aa14.68□□□□□ -0.06
SS18-222ENST00000582792 SF3A2Q15428 464 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms